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The map label for this gene is yafE [C]

Identifier: 195978088

GI number: 195978088

Start: 1002429

End: 1003184

Strand: Direct

Name: yafE [C]

Synonym: Sez_0961

Alternate gene names: 195978088

Gene position: 1002429-1003184 (Clockwise)

Preceding gene: 195978083

Following gene: 195978089

Centisome position: 49.52

GC content: 42.99

Gene sequence:

>756_bases
ATGTCTCAAAAAGAAGTTGGTCACCAGTTTTTAGCTCGACTGGGAAAGAAACGACTACGGCCTGGTGGTGTTGAGGCGAC
AAATTGGCTGATTCAGCAAGGAGAGTTTTCGAGTGATTGCAAGGTCTTGGAGGTGGCCTGCAACCGTTGCACGACCTCCA
TTGAGCTGGCACAGACTTATCAGTGTCATATTACAGCAGTGGATTTGGATACCAAGGTACTGGCGGAGGCAAGAAAGGCT
ATTGAGGCAGCTCAAATGCAAGACTATATTCACCTTACTCAAGCTAATGCCTTGAAGCTGCCTTTTGCAGATAATAGCTT
TGATATCGTTATTAACGAAGCTATGCTAACCATGTTGAATGATGCTGCAAAGGAAAAAGCACTCAAGGAATATTGGCGTG
TTTTAAAGCCGGGTGGTCGCTTACTAACGCATGATGTTTCCTATGAAGCTGATGAAACAAAGGCTGTTATAGAGCAACTA
AGAGATACGATTAATGTGAACGTATCGCCATTGCAGTTAGATGCCTGGAGACAATTGCTGGTAAAGAGTGGTTTCACAGC
AGTCAATTACTCCTATGGTAACATGACGCTCATGTCCCCGCTTGGCATGATTAAAGATGAAGGGGTTGTCGATGCGATTT
GTATTATGCTGCGCGGCATGAAAAAAGAAAATCGAAAGCAGTTTTTAAAGATGCGTCATTTCTTCAACAAAACTGGAAAA
AAGCTGTGTTATATTGCCGCTGTAAGTCAAAAATAA

Upstream 100 bases:

>100_bases
TTAAGTGTGATATAGTTGTAGTAATCATTTATTGATCAATTTGTTAACAGTTAGTTTATTCTAAGTAAGAATATATAGCA
GAGCAATAGGAGGGCATGTG

Downstream 100 bases:

>100_bases
CTAGAATAATGATAAAGGAGAAGTGACATGTCATTGATTCATAAAATTCCAACAAGCGCAGTCATTGATTTAAAGGCAGA
GGTGCCAATTGAAGAGGATC

Product: ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSQKEVGHQFLARLGKKRLRPGGVEATNWLIQQGEFSSDCKVLEVACNRCTTSIELAQTYQCHITAVDLDTKVLAEARKA
IEAAQMQDYIHLTQANALKLPFADNSFDIVINEAMLTMLNDAAKEKALKEYWRVLKPGGRLLTHDVSYEADETKAVIEQL
RDTINVNVSPLQLDAWRQLLVKSGFTAVNYSYGNMTLMSPLGMIKDEGVVDAICIMLRGMKKENRKQFLKMRHFFNKTGK
KLCYIAAVSQK

Sequences:

>Translated_251_residues
MSQKEVGHQFLARLGKKRLRPGGVEATNWLIQQGEFSSDCKVLEVACNRCTTSIELAQTYQCHITAVDLDTKVLAEARKA
IEAAQMQDYIHLTQANALKLPFADNSFDIVINEAMLTMLNDAAKEKALKEYWRVLKPGGRLLTHDVSYEADETKAVIEQL
RDTINVNVSPLQLDAWRQLLVKSGFTAVNYSYGNMTLMSPLGMIKDEGVVDAICIMLRGMKKENRKQFLKMRHFFNKTGK
KLCYIAAVSQK
>Mature_250_residues
SQKEVGHQFLARLGKKRLRPGGVEATNWLIQQGEFSSDCKVLEVACNRCTTSIELAQTYQCHITAVDLDTKVLAEARKAI
EAAQMQDYIHLTQANALKLPFADNSFDIVINEAMLTMLNDAAKEKALKEYWRVLKPGGRLLTHDVSYEADETKAVIEQLR
DTINVNVSPLQLDAWRQLLVKSGFTAVNYSYGNMTLMSPLGMIKDEGVVDAICIMLRGMKKENRKQFLKMRHFFNKTGKK
LCYIAAVSQK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786404, Length=183, Percent_Identity=32.7868852459016, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28321; Mature: 28190

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKEVGHQFLARLGKKRLRPGGVEATNWLIQQGEFSSDCKVLEVACNRCTTSIELAQTY
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHEEEE
QCHITAVDLDTKVLAEARKAIEAAQMQDYIHLTQANALKLPFADNSFDIVINEAMLTMLN
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCEEEEHHHHHHHHH
DAAKEKALKEYWRVLKPGGRLLTHDVSYEADETKAVIEQLRDTINVNVSPLQLDAWRQLL
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH
VKSGFTAVNYSYGNMTLMSPLGMIKDEGVVDAICIMLRGMKKENRKQFLKMRHFFNKTGK
HHCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
KLCYIAAVSQK
EEEEEEEECCC
>Mature Secondary Structure 
SQKEVGHQFLARLGKKRLRPGGVEATNWLIQQGEFSSDCKVLEVACNRCTTSIELAQTY
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHEEEE
QCHITAVDLDTKVLAEARKAIEAAQMQDYIHLTQANALKLPFADNSFDIVINEAMLTMLN
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCEEEEHHHHHHHHH
DAAKEKALKEYWRVLKPGGRLLTHDVSYEADETKAVIEQLRDTINVNVSPLQLDAWRQLL
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH
VKSGFTAVNYSYGNMTLMSPLGMIKDEGVVDAICIMLRGMKKENRKQFLKMRHFFNKTGK
HHCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
KLCYIAAVSQK
EEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]