Click here to switch to the map view.

The map label for this gene is yfmM [H]

Identifier: 195978081

GI number: 195978081

Start: 995070

End: 996656

Strand: Direct

Name: yfmM [H]

Synonym: Sez_0954

Alternate gene names: 195978081

Gene position: 995070-996656 (Clockwise)

Preceding gene: 195978079

Following gene: 195978082

Centisome position: 49.16

GC content: 42.72

Gene sequence:

>1587_bases
TTGACGGCTTTTTTGATGACAATGAAGGAAGTAATCATGAGCATATTAGAAGTTAAACAGTTAAGTCATGGATTTGGTGA
TCGTGCCATTTTTGAAGATGTCTCCTTTCGTCTTTTAAAGGGCGAGCATATTGGATTAGTAGGAGCAAATGGAGAAGGCA
AGTCCACCTTTATGAGTATTGTTACTGGTCACTTGCAGCCAGACGCTGGTAAGATTGAATGGTCAAAGTATGTTACAGTA
GGCTATTTGGATCAGCATACCGTTTTAGAGCCTGGTCAAACTGTGCGTGATGTTCTTAGGACAGCCTTTGATGAGCTATT
CAAAACAGAGGAGCGTATCAATGCCATTTACATGTCTATGGCAGAGGAGACAGCTGATGTCGATGCCTTGATGGAAGAGG
TCGGAGAGCTACAGGACCGTCTTGAAAGCAGGGACTTTTATACCCTAGATGCTAAGATTGATGAGGTTGCGCGTGCCTTA
GGAGTTATGGATTTTGGGATGGAAACAGAAGTGACCTCCTTATCTGGAGGGCAAAGAACCAAGATTCTGCTGGCCAAGCT
GTTACTGGAGAAGCCAGATATTTTGCTGCTGGACGAGCCGACCAATTATCTTGATGCTGAGCATATTGAGTGGTTAAAGC
GCTATTTACAGCATTATGACAATGCCTTTGTGCTCATTTCACATGATATTCCTTTTTTAAATGATGTCATTAATATTGTT
TATCATGTTGATAATCGGAATTTGGTTAGGTATTCTGGAAATTACGATCAGTTTAAGGAAGTCTATGAGATGAAAAAGGC
TCAGCTAGAGGCAGCCTATGAGCGTCAGCAAAAAGAGATTGCAGAGCTACAGGATTTTGTCAATCGTAATAAGGCCAGAG
TAGCTACCCGCAATATGGCTATGTCCCGTCAAAAGAAGCTTGATAAAATGGAAATCATTGAGCTTCAGGCAGAAAAACCA
AAGCCAAGCTTTGAGTTTAAGGAAGCAAGAACACCAAGCCGCTTTATTTTCCAAACAAGGGAGCTTGTCATCGGCTATGA
CAGACCCTTAACAAAAGATCCCTTGAACTTAACATTTGAGCGTCATCAAAAAGTTGCAATTATCGGTGCTAATGGTATTG
GTAAGTCAACCCTCCTAAAGAGCCTGCTTGGCATTATTCAGCCACTGTCAGGAGAGGTGGAAACAGGAGATTTCGTGGAG
CTTGGTTATTTTGAGCAAGAAACTGCAGGTGTTAAGCGTCAGACCCCACTAGAAGCAGTGTGGGACGCTTTTCCTGCTTT
AAATCAAGCAGAGGTTCGAGCAGCCTTAGCCCGTTGTGGTCTAACCTCTAAGCATATTGAAAGTCAGATTCAGGTGCTCT
CTGGTGGTGAGCAAGCCAAGGTTCGTTTTTGTCTCTTAATGAATCGTGAGCACAATGTTTTAATCCTAGATGAGCCAACC
AATCATTTAGATGTAGATGCCAAGGAGGAGCTAAAGCGCGCCTTGCAAGCCTATAAAGGCTCTATTTTGATGGTTTGCCA
TGAGCCGGAGTTTTATGAGGGCTGGGTAACTGATATTTGGGATTTCAATCAATTAACGTCATCATAG

Upstream 100 bases:

>100_bases
TTTTTTTGATAAAAATCTTTTATGCGTATGATGTGGGCTTTTTCAGCCTTCATTGACAAAAGATTGCATTTTTGCCATAA
TTGAGGGAGCATAGGCCGTC

Downstream 100 bases:

>100_bases
CAGATGTTCAAGGTCTTTATCTTGGACATTTTTGCTACCTAAAGCAAAATCATTGACGATAGACCTGTATTTTAGTAAAA
TGACAATATAATAAATAAAA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MTAFLMTMKEVIMSILEVKQLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDAGKIEWSKYVTV
GYLDQHTVLEPGQTVRDVLRTAFDELFKTEERINAIYMSMAEETADVDALMEEVGELQDRLESRDFYTLDAKIDEVARAL
GVMDFGMETEVTSLSGGQRTKILLAKLLLEKPDILLLDEPTNYLDAEHIEWLKRYLQHYDNAFVLISHDIPFLNDVINIV
YHVDNRNLVRYSGNYDQFKEVYEMKKAQLEAAYERQQKEIAELQDFVNRNKARVATRNMAMSRQKKLDKMEIIELQAEKP
KPSFEFKEARTPSRFIFQTRELVIGYDRPLTKDPLNLTFERHQKVAIIGANGIGKSTLLKSLLGIIQPLSGEVETGDFVE
LGYFEQETAGVKRQTPLEAVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNREHNVLILDEPT
NHLDVDAKEELKRALQAYKGSILMVCHEPEFYEGWVTDIWDFNQLTSS

Sequences:

>Translated_528_residues
MTAFLMTMKEVIMSILEVKQLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDAGKIEWSKYVTV
GYLDQHTVLEPGQTVRDVLRTAFDELFKTEERINAIYMSMAEETADVDALMEEVGELQDRLESRDFYTLDAKIDEVARAL
GVMDFGMETEVTSLSGGQRTKILLAKLLLEKPDILLLDEPTNYLDAEHIEWLKRYLQHYDNAFVLISHDIPFLNDVINIV
YHVDNRNLVRYSGNYDQFKEVYEMKKAQLEAAYERQQKEIAELQDFVNRNKARVATRNMAMSRQKKLDKMEIIELQAEKP
KPSFEFKEARTPSRFIFQTRELVIGYDRPLTKDPLNLTFERHQKVAIIGANGIGKSTLLKSLLGIIQPLSGEVETGDFVE
LGYFEQETAGVKRQTPLEAVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNREHNVLILDEPT
NHLDVDAKEELKRALQAYKGSILMVCHEPEFYEGWVTDIWDFNQLTSS
>Mature_527_residues
TAFLMTMKEVIMSILEVKQLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDAGKIEWSKYVTVG
YLDQHTVLEPGQTVRDVLRTAFDELFKTEERINAIYMSMAEETADVDALMEEVGELQDRLESRDFYTLDAKIDEVARALG
VMDFGMETEVTSLSGGQRTKILLAKLLLEKPDILLLDEPTNYLDAEHIEWLKRYLQHYDNAFVLISHDIPFLNDVINIVY
HVDNRNLVRYSGNYDQFKEVYEMKKAQLEAAYERQQKEIAELQDFVNRNKARVATRNMAMSRQKKLDKMEIIELQAEKPK
PSFEFKEARTPSRFIFQTRELVIGYDRPLTKDPLNLTFERHQKVAIIGANGIGKSTLLKSLLGIIQPLSGEVETGDFVEL
GYFEQETAGVKRQTPLEAVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNREHNVLILDEPTN
HLDVDAKEELKRALQAYKGSILMVCHEPEFYEGWVTDIWDFNQLTSS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=502, Percent_Identity=27.2908366533865, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI10947137, Length=520, Percent_Identity=28.6538461538462, Blast_Score=196, Evalue=6e-50,
Organism=Homo sapiens, GI27881506, Length=520, Percent_Identity=28.6538461538462, Blast_Score=196, Evalue=7e-50,
Organism=Homo sapiens, GI10947135, Length=516, Percent_Identity=31.3953488372093, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI69354671, Length=516, Percent_Identity=31.3953488372093, Blast_Score=190, Evalue=3e-48,
Organism=Escherichia coli, GI1787041, Length=510, Percent_Identity=34.7058823529412, Blast_Score=281, Evalue=6e-77,
Organism=Escherichia coli, GI1789751, Length=512, Percent_Identity=28.3203125, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI2367384, Length=509, Percent_Identity=30.0589390962672, Blast_Score=236, Evalue=3e-63,
Organism=Escherichia coli, GI1787182, Length=528, Percent_Identity=29.7348484848485, Blast_Score=212, Evalue=5e-56,
Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=25.3061224489796, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994883, Length=272, Percent_Identity=26.8382352941176, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788165, Length=173, Percent_Identity=28.9017341040462, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790190, Length=207, Percent_Identity=26.5700483091787, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=506, Percent_Identity=31.4229249011858, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17559834, Length=514, Percent_Identity=28.5992217898833, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17555318, Length=518, Percent_Identity=28.7644787644788, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI193208177, Length=263, Percent_Identity=26.615969581749, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321121, Length=518, Percent_Identity=31.0810810810811, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=30.6967984934087, Blast_Score=209, Evalue=7e-55,
Organism=Saccharomyces cerevisiae, GI6325030, Length=400, Percent_Identity=28.25, Blast_Score=133, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=397, Percent_Identity=26.9521410579345, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=391, Percent_Identity=26.0869565217391, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24666836, Length=516, Percent_Identity=28.6821705426357, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24641342, Length=500, Percent_Identity=29.4, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24642252, Length=521, Percent_Identity=28.4069097888676, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI18859989, Length=521, Percent_Identity=28.4069097888676, Blast_Score=192, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60256; Mature: 60124

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFLMTMKEVIMSILEVKQLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSI
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHH
VTGHLQPDAGKIEWSKYVTVGYLDQHTVLEPGQTVRDVLRTAFDELFKTEERINAIYMSM
HHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEETADVDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMETEVTSLSGGQRT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCHH
KILLAKLLLEKPDILLLDEPTNYLDAEHIEWLKRYLQHYDNAFVLISHDIPFLNDVINIV
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
YHVDNRNLVRYSGNYDQFKEVYEMKKAQLEAAYERQQKEIAELQDFVNRNKARVATRNMA
EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MSRQKKLDKMEIIELQAEKPKPSFEFKEARTPSRFIFQTRELVIGYDRPLTKDPLNLTFE
HHHHHCCCHHHEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCEEE
RHQKVAIIGANGIGKSTLLKSLLGIIQPLSGEVETGDFVELGYFEQETAGVKRQTPLEAV
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHH
WDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNREHNVLILDEPT
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCC
NHLDVDAKEELKRALQAYKGSILMVCHEPEFYEGWVTDIWDFNQLTSS
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHCCHHHHHHCHHHHCCC
>Mature Secondary Structure 
TAFLMTMKEVIMSILEVKQLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSI
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHH
VTGHLQPDAGKIEWSKYVTVGYLDQHTVLEPGQTVRDVLRTAFDELFKTEERINAIYMSM
HHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEETADVDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMETEVTSLSGGQRT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCHH
KILLAKLLLEKPDILLLDEPTNYLDAEHIEWLKRYLQHYDNAFVLISHDIPFLNDVINIV
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
YHVDNRNLVRYSGNYDQFKEVYEMKKAQLEAAYERQQKEIAELQDFVNRNKARVATRNMA
EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MSRQKKLDKMEIIELQAEKPKPSFEFKEARTPSRFIFQTRELVIGYDRPLTKDPLNLTFE
HHHHHCCCHHHEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCEEE
RHQKVAIIGANGIGKSTLLKSLLGIIQPLSGEVETGDFVELGYFEQETAGVKRQTPLEAV
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHH
WDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNREHNVLILDEPT
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCC
NHLDVDAKEELKRALQAYKGSILMVCHEPEFYEGWVTDIWDFNQLTSS
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHCCHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]