Click here to switch to the map view.

The map label for this gene is 195978079

Identifier: 195978079

GI number: 195978079

Start: 993890

End: 994435

Strand: Direct

Name: 195978079

Synonym: Sez_0952

Alternate gene names: NA

Gene position: 993890-994435 (Clockwise)

Preceding gene: 195978078

Following gene: 195978081

Centisome position: 49.1

GC content: 42.67

Gene sequence:

>546_bases
TTGACTGATCAGATCGAGCTTAGCCTATTTGCTGCTCTTATTTTTATATCGGTTGAGCTGCTGCGTATTCCAGTTGGAGC
CCAATTTATTCATCTAGGGAATGCCTTAGTGGTGGTGGCTGTTTTATTGTATGGTGCTAGAAGGGCAGCTTTGGTGGCAG
CCATTGGTCTAGGACTGTTTGATATGATTAATGGCTATGCGGCTGTGGTCTGGATAACAGTGCTTGAAGCCTTAGTGGTT
TGTTACCTGCTTCATGTGATTTATGAGAAACTTCTGAAATCAGTTGATAAACCGATGATTATTGTAGCAATTGGCTTATT
AGCAGCAGCAGCAAAATTAGTCATGAATCTTGTGAAATATAGCTTGATTGCTTATTTTGGCGCCCAGTTACCCCTGTCTG
TTGCTTTGTGGGCAGCACTTGGCAAAATTGGTGGCAGTCTTGGTACTGCCCTTGTGACCGTTATTGCTGTGCCTCTCTTA
TACCCTGTTTTTAAGCAATTAAGGCAGGCAGTAAAAAAGAAAGAAGCGAGTAATAGGCTTGGTTGA

Upstream 100 bases:

>100_bases
AATCGAGAGCTTTCACTTGGAATTGCCTACGAAGCAGAATTGGGCAGCTTGGGAGCCGCATTTAGAAGATTATTGGAGGA
AAAAGATGATATCAAAACGA

Downstream 100 bases:

>100_bases
GCTAACCTTGCTAGCAGTATCATCATTTTTGTTATCTAAGCCTATTAATAACTAATGATTTGACAAACTATTTTTAGTTA
TTTTTAATGAAATAACGGTA

Product: integral membrane protein

Products: NA

Alternate protein names: Ypothetical Protein SMU.

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTDQIELSLFAALIFISVELLRIPVGAQFIHLGNALVVVAVLLYGARRAALVAAIGLGLFDMINGYAAVVWITVLEALVV
CYLLHVIYEKLLKSVDKPMIIVAIGLLAAAAKLVMNLVKYSLIAYFGAQLPLSVALWAALGKIGGSLGTALVTVIAVPLL
YPVFKQLRQAVKKKEASNRLG

Sequences:

>Translated_181_residues
MTDQIELSLFAALIFISVELLRIPVGAQFIHLGNALVVVAVLLYGARRAALVAAIGLGLFDMINGYAAVVWITVLEALVV
CYLLHVIYEKLLKSVDKPMIIVAIGLLAAAAKLVMNLVKYSLIAYFGAQLPLSVALWAALGKIGGSLGTALVTVIAVPLL
YPVFKQLRQAVKKKEASNRLG
>Mature_180_residues
TDQIELSLFAALIFISVELLRIPVGAQFIHLGNALVVVAVLLYGARRAALVAAIGLGLFDMINGYAAVVWITVLEALVVC
YLLHVIYEKLLKSVDKPMIIVAIGLLAAAAKLVMNLVKYSLIAYFGAQLPLSVALWAALGKIGGSLGTALVTVIAVPLLY
PVFKQLRQAVKKKEASNRLG

Specific function: Unknown

COG id: COG4720

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19341; Mature: 19210

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQIELSLFAALIFISVELLRIPVGAQFIHLGNALVVVAVLLYGARRAALVAAIGLGLF
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMINGYAAVVWITVLEALVVCYLLHVIYEKLLKSVDKPMIIVAIGLLAAAAKLVMNLVKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SLIAYFGAQLPLSVALWAALGKIGGSLGTALVTVIAVPLLYPVFKQLRQAVKKKEASNRL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
G
C
>Mature Secondary Structure 
TDQIELSLFAALIFISVELLRIPVGAQFIHLGNALVVVAVLLYGARRAALVAAIGLGLF
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMINGYAAVVWITVLEALVVCYLLHVIYEKLLKSVDKPMIIVAIGLLAAAAKLVMNLVKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SLIAYFGAQLPLSVALWAALGKIGGSLGTALVTVIAVPLLYPVFKQLRQAVKKKEASNRL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA