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The map label for this gene is nrdD [C]

Identifier: 195978076

GI number: 195978076

Start: 991291

End: 991629

Strand: Direct

Name: nrdD [C]

Synonym: Sez_0949

Alternate gene names: 195978076

Gene position: 991291-991629 (Clockwise)

Preceding gene: 195978075

Following gene: 195978078

Centisome position: 48.97

GC content: 41.3

Gene sequence:

>339_bases
ATGCAAATTATTAAGCGTGACGGTCAGCTGGCAGACTTTGATCCGGATAAGATTTATCAGGCTTTGATTAAGGCAGCAAG
AACAGTTTATGTGATTGATGACAGCTGGAGACAGCATCTAGCTCAGGTAACTAAAAAGGTTGTTATTGATCTAGAGGAGG
TGCAGGCGGAGCGTCCGACGATTAATATGATTCAATCACTTGTTGAAAATCGTCTGATTGATGCAGGTTACATGACTATT
GCAGAGCATTATATTGCTTACCGCCTCCAAAGAGATTTGGAGAGAAATGGCTACGGTGATAGCATTAGTGTTCATTTACG
ATTCGAGCAGATCAAATAG

Upstream 100 bases:

>100_bases
ATCATTCCTAAGAGGTATAGGAGCCTAATAGCTTGACAAATGATGAAAACATTTGCATAATGAATGTAAGCAATGAAACT
AAATGAAAAGAGGCGCTCTT

Downstream 100 bases:

>100_bases
CTATTGACATTTTTATGACACTGAGACCCAATGAGCTATTCTTGGGTCTTTTCATGTGTCACTGAAAACAAGTCAAGCAG
CTTAGATGGCATGTCAGGGC

Product: anaerobic ribonucleoside triphosphate reductase NrdD

Products: dUTP; H2O; Oxidized thioredoxin [C]

Alternate protein names: ATP Cone Domain-Containing Protein; Ribonucleotide Reductase; Oxygen-Sensitive Ribonucleoside-Triphosphate Reductase

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MQIIKRDGQLADFDPDKIYQALIKAARTVYVIDDSWRQHLAQVTKKVVIDLEEVQAERPTINMIQSLVENRLIDAGYMTI
AEHYIAYRLQRDLERNGYGDSISVHLRFEQIK

Sequences:

>Translated_112_residues
MQIIKRDGQLADFDPDKIYQALIKAARTVYVIDDSWRQHLAQVTKKVVIDLEEVQAERPTINMIQSLVENRLIDAGYMTI
AEHYIAYRLQRDLERNGYGDSISVHLRFEQIK
>Mature_112_residues
MQIIKRDGQLADFDPDKIYQALIKAARTVYVIDDSWRQHLAQVTKKVVIDLEEVQAERPTINMIQSLVENRLIDAGYMTI
AEHYIAYRLQRDLERNGYGDSISVHLRFEQIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.17.4.2 [C]

Molecular weight: Translated: 13105; Mature: 13105

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIKRDGQLADFDPDKIYQALIKAARTVYVIDDSWRQHLAQVTKKVVIDLEEVQAERPT
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
INMIQSLVENRLIDAGYMTIAEHYIAYRLQRDLERNGYGDSISVHLRFEQIK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQIIKRDGQLADFDPDKIYQALIKAARTVYVIDDSWRQHLAQVTKKVVIDLEEVQAERPT
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
INMIQSLVENRLIDAGYMTIAEHYIAYRLQRDLERNGYGDSISVHLRFEQIK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Ca2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced thioredoxin; UTP [C]

Specific reaction: Reduced thioredoxin + UTP --> dUTP + H2O + Oxidized thioredoxin [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA