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The map label for this gene is 195978025

Identifier: 195978025

GI number: 195978025

Start: 940886

End: 941527

Strand: Direct

Name: 195978025

Synonym: Sez_0898

Alternate gene names: NA

Gene position: 940886-941527 (Clockwise)

Preceding gene: 195978024

Following gene: 195978027

Centisome position: 46.48

GC content: 39.25

Gene sequence:

>642_bases
ATGACTAGTAATAAGAGAGAGATTACTAATTCCAAGTATCAAAAGATTGCCATTTCAGTTGCTGAAAGGATTGCCAATGG
CGAATATGAGGTGGGAGAAAAGCTAAAGTCTAGGACAACCATTGCTTCAACCTTTAATGTCTCACCTGAAACTGCTAGAA
AGGGTCTGAATATTCTGGCTGATTTGAAGATTTTGACCTTAAAGCATGGGAGTGGCGCCATTGTCTTGTCTAAGGAAAAG
GCTATTGATTTTCTGAACCAATACGAATCCACCCATTCTATCGCTGTCATCAAAGAAAATATTCGCCATAATATTCGTGA
GCAGGAAAAGGCAATGGAGCATTTAACAGTGCTTGTTAATGAGTTTCTGATGCAAAGCCAATCAATCAGCAAGCAATACC
CGCTGGCACCTTACGAAATTATTTGTAGTCAGGATTCAGAGCATTTTGGCCAATCGATTGGTGATTTAAACATTTGGCAT
CAAACGGGAGCGACGATTGTAGCTATTGAGCATGATGGCCAATTCACTATTTCTCCAGGTCCTTACGCTGTTATCGAAAA
AGGTGATCATATTTACTTTGTCGGTAATGAGGACGTGATTTCTAGAATGAAAACCTTTTTTAATGTTAGAAAGGGTCTGT
AA

Upstream 100 bases:

>100_bases
TCTTTTTATCAGTGCTTGAACAATGTTATGCTATTGTATTCTCTGTGAAAATGTGATTTAATGGGAATGGTATCATTTGT
TAAAAAGGAGTATAATTATC

Downstream 100 bases:

>100_bases
TCGCAAAAAAACACAGAGCTGCTTTAAGGTGATAGTGATATCACGAGGAAGTGTCTCTGTGTTTTTGTGTCATCAGGTTA
AGGCTTCTAAGTAGCTTATA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; TrkA Domain-Containing Protein; Regulatory Protein; Transcriptional Repressor BusR; TrkA-C Domain Protein; GntR Family Regulatory Protein; Regulatory Protein GntR HTH; TrkA-C Domain-Containing Protein; Fused Transcriptional Regulator/Membrane Protein; GntR Family Transcription Regulator; Gntr-Family Transcriptional Regulator

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTSNKREITNSKYQKIAISVAERIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILADLKILTLKHGSGAIVLSKEK
AIDFLNQYESTHSIAVIKENIRHNIREQEKAMEHLTVLVNEFLMQSQSISKQYPLAPYEIICSQDSEHFGQSIGDLNIWH
QTGATIVAIEHDGQFTISPGPYAVIEKGDHIYFVGNEDVISRMKTFFNVRKGL

Sequences:

>Translated_213_residues
MTSNKREITNSKYQKIAISVAERIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILADLKILTLKHGSGAIVLSKEK
AIDFLNQYESTHSIAVIKENIRHNIREQEKAMEHLTVLVNEFLMQSQSISKQYPLAPYEIICSQDSEHFGQSIGDLNIWH
QTGATIVAIEHDGQFTISPGPYAVIEKGDHIYFVGNEDVISRMKTFFNVRKGL
>Mature_212_residues
TSNKREITNSKYQKIAISVAERIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILADLKILTLKHGSGAIVLSKEKA
IDFLNQYESTHSIAVIKENIRHNIREQEKAMEHLTVLVNEFLMQSQSISKQYPLAPYEIICSQDSEHFGQSIGDLNIWHQ
TGATIVAIEHDGQFTISPGPYAVIEKGDHIYFVGNEDVISRMKTFFNVRKGL

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23924; Mature: 23792

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNKREITNSKYQKIAISVAERIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILA
CCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCHHHHHCCCCHHC
DLKILTLKHGSGAIVLSKEKAIDFLNQYESTHSIAVIKENIRHNIREQEKAMEHLTVLVN
CEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLMQSQSISKQYPLAPYEIICSQDSEHFGQSIGDLNIWHQTGATIVAIEHDGQFTISPG
HHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEECCCCEEEEEEECCEEEECCC
PYAVIEKGDHIYFVGNEDVISRMKTFFNVRKGL
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSNKREITNSKYQKIAISVAERIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILA
CCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCHHHHHCCCCHHC
DLKILTLKHGSGAIVLSKEKAIDFLNQYESTHSIAVIKENIRHNIREQEKAMEHLTVLVN
CEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLMQSQSISKQYPLAPYEIICSQDSEHFGQSIGDLNIWHQTGATIVAIEHDGQFTISPG
HHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEECCCCEEEEEEECCEEEECCC
PYAVIEKGDHIYFVGNEDVISRMKTFFNVRKGL
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA