Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 195977972

GI number: 195977972

Start: 888551

End: 889240

Strand: Direct

Name: ybfF [C]

Synonym: Sez_0844

Alternate gene names: 195977972

Gene position: 888551-889240 (Clockwise)

Preceding gene: 195977971

Following gene: 195977973

Centisome position: 43.9

GC content: 38.12

Gene sequence:

>690_bases
ATGAAAAAAGACTTATTGGTAATGATTCCAGCATATAACGAAGAAGAGTCGATTGAAAAAGTAGTGGAAAATATCAAAAG
ACATTTTCCTCAATATGATTATGTGATTATCAATGATGGCTCTTCGGATCGGACATCAGAGATATGTCATCATAACCATT
ACAATATCATTGATTTGCCGGAAAATCTTGGCTTATCTGGTGCTATTCAGACGGGCTTTAAGTACGCCTTTAAAAAGGGC
TATGCCAAAGCACTCCAGTTTGATGCAGATGGTCAGCACTTGCCAGAGTATATTGAGGCTTTGAGTGATTCAATCAAGGC
CGGTGCTGATTGTGTCATTGGATCAAGGTTTGTCAGTGCTGAAAAGAATAGATCCTTGAGAATGATGGGCAATAGCCTTA
TTAGCTTTTTTATCAAGCTAACCACCGGAAAGCGTATTACCGATCCGACCTCTGGTATGAGAATGTTTAATCAGGAGCTG
ATCAGGATTTTTGCAACTAATATTAACTATACTCCAGAGCCTGATACGATCTCTTATCTTATTCGACAAGGCTATAGGGT
GAGTGAGGTTCAGGTGCAAATGAATGATAGGCTGGCTGGTCAAAGCTACCTCACTCTTTCTAGATCTATTAAATACATGG
TTCACATGTTTATTTCGATTATTTTAATTCAAAACTTTAGAAAGAGGTAA

Upstream 100 bases:

>100_bases
AATATATTGTGATTGGGCCGGCTAAGGCTATCCGTTATATCATAAAGCGATTGCTAAAAAGACGCGTTTAGACGAATGAA
TAGAGAGAATATTTGACGAT

Downstream 100 bases:

>100_bases
GAGGATGTTTATTGGATTACAGCTGATTTTGATCATTGTTGCATTATTGACAGCCATGTTTATACTAGATAGCATTCGCA
GATCCAAAATTTTAATTGAA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKKDLLVMIPAYNEEESIEKVVENIKRHFPQYDYVIINDGSSDRTSEICHHNHYNIIDLPENLGLSGAIQTGFKYAFKKG
YAKALQFDADGQHLPEYIEALSDSIKAGADCVIGSRFVSAEKNRSLRMMGNSLISFFIKLTTGKRITDPTSGMRMFNQEL
IRIFATNINYTPEPDTISYLIRQGYRVSEVQVQMNDRLAGQSYLTLSRSIKYMVHMFISIILIQNFRKR

Sequences:

>Translated_229_residues
MKKDLLVMIPAYNEEESIEKVVENIKRHFPQYDYVIINDGSSDRTSEICHHNHYNIIDLPENLGLSGAIQTGFKYAFKKG
YAKALQFDADGQHLPEYIEALSDSIKAGADCVIGSRFVSAEKNRSLRMMGNSLISFFIKLTTGKRITDPTSGMRMFNQEL
IRIFATNINYTPEPDTISYLIRQGYRVSEVQVQMNDRLAGQSYLTLSRSIKYMVHMFISIILIQNFRKR
>Mature_229_residues
MKKDLLVMIPAYNEEESIEKVVENIKRHFPQYDYVIINDGSSDRTSEICHHNHYNIIDLPENLGLSGAIQTGFKYAFKKG
YAKALQFDADGQHLPEYIEALSDSIKAGADCVIGSRFVSAEKNRSLRMMGNSLISFFIKLTTGKRITDPTSGMRMFNQEL
IRIFATNINYTPEPDTISYLIRQGYRVSEVQVQMNDRLAGQSYLTLSRSIKYMVHMFISIILIQNFRKR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 26295; Mature: 26295

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDLLVMIPAYNEEESIEKVVENIKRHFPQYDYVIINDGSSDRTSEICHHNHYNIIDLP
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCEEECC
ENLGLSGAIQTGFKYAFKKGYAKALQFDADGQHLPEYIEALSDSIKAGADCVIGSRFVSA
CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCEEECHHHHHH
EKNRSLRMMGNSLISFFIKLTTGKRITDPTSGMRMFNQELIRIFATNINYTPEPDTISYL
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
IRQGYRVSEVQVQMNDRLAGQSYLTLSRSIKYMVHMFISIILIQNFRKR
HHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKDLLVMIPAYNEEESIEKVVENIKRHFPQYDYVIINDGSSDRTSEICHHNHYNIIDLP
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCEEECC
ENLGLSGAIQTGFKYAFKKGYAKALQFDADGQHLPEYIEALSDSIKAGADCVIGSRFVSA
CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCEEECHHHHHH
EKNRSLRMMGNSLISFFIKLTTGKRITDPTSGMRMFNQELIRIFATNINYTPEPDTISYL
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
IRQGYRVSEVQVQMNDRLAGQSYLTLSRSIKYMVHMFISIILIQNFRKR
HHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]