| Definition | Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome. |
|---|---|
| Accession | NC_011134 |
| Length | 2,024,171 |
Click here to switch to the map view.
The map label for this gene is dnaG [H]
Identifier: 195977962
GI number: 195977962
Start: 876928
End: 878739
Strand: Direct
Name: dnaG [H]
Synonym: Sez_0834
Alternate gene names: 195977962
Gene position: 876928-878739 (Clockwise)
Preceding gene: 195977960
Following gene: 195977963
Centisome position: 43.32
GC content: 42.77
Gene sequence:
>1812_bases ATGGGCTTTTTGTGGGGAGGTGACGGTTTGGCTATTGACAAAGAGATGATTTCTCAGATCAAGCATAATGTCAATATTGT TGATGTTATTGGAGAAGTTGTCCATCTATCGCGTACTGGTCGGCACTATCTTGGGCTGTGTCCCTTTCATAAAGAAAAAA CACCCTCTTTTAATGTCATCGAAGACAGACAGTTCTTTCACTGCTTTGGCTGCGGTAAGTCGGGGGATGTTTTTAAGTTT ATTGAGGAATATCGTCAGGTTCCTTTTTTAGAAAGTGTTCAGATTGTGGCTGATAAGGCCGGTATGGCAGTTACTATTGC TCCAAGTCAGGCTAGCTTAGGCCAAAAGCAGCACCCCCACCAGGCTTTAATTGACCTTCATGAAGATGCTGCTAAGTTTT ATCATGCGGTTTTGATGACGACAAAGATTGGTCAAAGAGCTAAGGAGTATCTTTATCAAAGAGGGCTTGATGATCAGCTA ATAGAGCATTTTCGGATTGGTTTGGCGCCTAACGAGATGGACTACCTTTATCAAGCCTTGTCAAAAAAGTATACTGAGGC GCAATTAACAGCCTCAGGCTTGTTTCATGTTTCTGAACAATCAAATGCTGTTTATGATGCCTTTCGTCATCGAATCATGT TTCCCTTATGTGATGATAAGGGCAATATGATTGCTTTTTCAGGGCGTATCTGGGCAAGAGAGGATATAGAAAAGCAGCAG GCTAAGTATAAAAATTCAAGGGCTACGGTCTTATTTAACAAGTCCTATGAGCTTTACCACCTTGATAAGGCCAAGCCGAT AATCGCTAAGACTCATGAGGTCTTTTTGATGGAAGGCTTTATGGACGTTATTGCAGCCTATCGGGCAGGCTATGGCAATG CTATTGCCTCTATGGGGACAGCATTGACGCCAGAGCATGTTAGACACCTCAAGCAGCTGACACAAAGGGTTATATTGACC TATGATGGTGATGACGCCGGGCAAAATGCTATTGCCAAGTCTCTTGAGCTGCTGACAGATTTTCAAGTGGAGATCGTGAA AATACCAAATAGAATGGATCCTGATGAATTTGTTCAGCAGCATTCACCAGAGGCTCTAGCAAAATTGCTCCAGCACTCGC GCATTAGCAGTGTTGAGTTTTTGATTGATCACCTGAAGCCTGAAAATATGGATAACCTGCAATCGCAGATTGCTTATGTG GAGCATATATCACAGATTATTGCTCAAGCACCCTCAATCACCGCACAAAATTCGTATATTAATAAGGTGGCTGATTTGCT GCCGGATTTTGATTATTTTCAGGTGGAGCAATCGGTAAATGCTTTAAGGCTGCAAGATAGACAAAGCTTACAAGGACAGA CTAGTCAATCAAAAGCATCTCTTGTGACCTTACCGATTAACAAAAGCATGACAGCCTTGGCTAAAACAGAAAGTCACCTC CTGCATCGCTTGCTTCATCACGACTATTTGCTCAATGAATTTCGTCATCGGCCGGATTTTTATTTTGATACACCAGCCCT TCAGACGCTGTATGAGCAGCTAAAGGCCACAGGGCAGATTACCTCCTATGACCTATCGCAACTGTCTGAAGAGGTTAACC AAGCCTATTACCGGGTTTTAGAGGAAAATCTTCCTGATGAGATAGCTAGCGGTGAGATTGAGGATATTTTATCAAGGCAA ATGACATTGCTAAAGCAAAGAGAGCTGCATAGGCAAGGAAAGCAGATTAGGGAATCTAGCAGTAAGGGTGACCACCAGAT GGCTCTAGAGGCTTTAGAGCGTTTCATTGCTGAAAAAAGAAAAATGGAATAG
Upstream 100 bases:
>100_bases TAGCTTATTGCTTGATGTAGTAGGCTTTAGATGATGAAGGATTGTGCTTTTACAATTTACAAAGCCCACTTTCAATGGTA TAATGAAATGTAAATTTACA
Downstream 100 bases:
>100_bases AGGAAAATATGGCAAAAGAAAAAGAAGTTACAACCTTTAACGTTCAAGTTGCGGAGTTTATTCGTCATCATAAAAAGGAA GGAACAGCTACTGATGATGA
Product: DNA primase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MGFLWGGDGLAIDKEMISQIKHNVNIVDVIGEVVHLSRTGRHYLGLCPFHKEKTPSFNVIEDRQFFHCFGCGKSGDVFKF IEEYRQVPFLESVQIVADKAGMAVTIAPSQASLGQKQHPHQALIDLHEDAAKFYHAVLMTTKIGQRAKEYLYQRGLDDQL IEHFRIGLAPNEMDYLYQALSKKYTEAQLTASGLFHVSEQSNAVYDAFRHRIMFPLCDDKGNMIAFSGRIWAREDIEKQQ AKYKNSRATVLFNKSYELYHLDKAKPIIAKTHEVFLMEGFMDVIAAYRAGYGNAIASMGTALTPEHVRHLKQLTQRVILT YDGDDAGQNAIAKSLELLTDFQVEIVKIPNRMDPDEFVQQHSPEALAKLLQHSRISSVEFLIDHLKPENMDNLQSQIAYV EHISQIIAQAPSITAQNSYINKVADLLPDFDYFQVEQSVNALRLQDRQSLQGQTSQSKASLVTLPINKSMTALAKTESHL LHRLLHHDYLLNEFRHRPDFYFDTPALQTLYEQLKATGQITSYDLSQLSEEVNQAYYRVLEENLPDEIASGEIEDILSRQ MTLLKQRELHRQGKQIRESSSKGDHQMALEALERFIAEKRKME
Sequences:
>Translated_603_residues MGFLWGGDGLAIDKEMISQIKHNVNIVDVIGEVVHLSRTGRHYLGLCPFHKEKTPSFNVIEDRQFFHCFGCGKSGDVFKF IEEYRQVPFLESVQIVADKAGMAVTIAPSQASLGQKQHPHQALIDLHEDAAKFYHAVLMTTKIGQRAKEYLYQRGLDDQL IEHFRIGLAPNEMDYLYQALSKKYTEAQLTASGLFHVSEQSNAVYDAFRHRIMFPLCDDKGNMIAFSGRIWAREDIEKQQ AKYKNSRATVLFNKSYELYHLDKAKPIIAKTHEVFLMEGFMDVIAAYRAGYGNAIASMGTALTPEHVRHLKQLTQRVILT YDGDDAGQNAIAKSLELLTDFQVEIVKIPNRMDPDEFVQQHSPEALAKLLQHSRISSVEFLIDHLKPENMDNLQSQIAYV EHISQIIAQAPSITAQNSYINKVADLLPDFDYFQVEQSVNALRLQDRQSLQGQTSQSKASLVTLPINKSMTALAKTESHL LHRLLHHDYLLNEFRHRPDFYFDTPALQTLYEQLKATGQITSYDLSQLSEEVNQAYYRVLEENLPDEIASGEIEDILSRQ MTLLKQRELHRQGKQIRESSSKGDHQMALEALERFIAEKRKME >Mature_602_residues GFLWGGDGLAIDKEMISQIKHNVNIVDVIGEVVHLSRTGRHYLGLCPFHKEKTPSFNVIEDRQFFHCFGCGKSGDVFKFI EEYRQVPFLESVQIVADKAGMAVTIAPSQASLGQKQHPHQALIDLHEDAAKFYHAVLMTTKIGQRAKEYLYQRGLDDQLI EHFRIGLAPNEMDYLYQALSKKYTEAQLTASGLFHVSEQSNAVYDAFRHRIMFPLCDDKGNMIAFSGRIWAREDIEKQQA KYKNSRATVLFNKSYELYHLDKAKPIIAKTHEVFLMEGFMDVIAAYRAGYGNAIASMGTALTPEHVRHLKQLTQRVILTY DGDDAGQNAIAKSLELLTDFQVEIVKIPNRMDPDEFVQQHSPEALAKLLQHSRISSVEFLIDHLKPENMDNLQSQIAYVE HISQIIAQAPSITAQNSYINKVADLLPDFDYFQVEQSVNALRLQDRQSLQGQTSQSKASLVTLPINKSMTALAKTESHLL HRLLHHDYLLNEFRHRPDFYFDTPALQTLYEQLKATGQITSYDLSQLSEEVNQAYYRVLEENLPDEIASGEIEDILSRQM TLLKQRELHRQGKQIRESSSKGDHQMALEALERFIAEKRKME
Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
Organism=Escherichia coli, GI1789447, Length=387, Percent_Identity=34.625322997416, Blast_Score=223, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013264 - InterPro: IPR019475 - InterPro: IPR006295 - InterPro: IPR006171 - InterPro: IPR002694 [H]
Pfam domain/function: PF10410 DnaB_bind; PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]
EC number: 2.7.7.-
Molecular weight: Translated: 68888; Mature: 68757
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLWGGDGLAIDKEMISQIKHNVNIVDVIGEVVHLSRTGRHYLGLCPFHKEKTPSFNVI CCEEECCCCCEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEE EDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIVADKAGMAVTIAPSQASLGQKQHPH CCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHCCCCCCCH QALIDLHEDAAKFYHAVLMTTKIGQRAKEYLYQRGLDDQLIEHFRIGLAPNEMDYLYQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH SKKYTEAQLTASGLFHVSEQSNAVYDAFRHRIMFPLCDDKGNMIAFSGRIWAREDIEKQQ HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHEECEEECCCCCEEEEECCCCCHHHHHHHH AKYKNSRATVLFNKSYELYHLDKAKPIIAKTHEVFLMEGFMDVIAAYRAGYGNAIASMGT HHHCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC ALTPEHVRHLKQLTQRVILTYDGDDAGQNAIAKSLELLTDFQVEIVKIPNRMDPDEFVQQ CCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHC HSPEALAKLLQHSRISSVEFLIDHLKPENMDNLQSQIAYVEHISQIIAQAPSITAQNSYI CCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH NKVADLLPDFDYFQVEQSVNALRLQDRQSLQGQTSQSKASLVTLPINKSMTALAKTESHL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHH LHRLLHHDYLLNEFRHRPDFYFDTPALQTLYEQLKATGQITSYDLSQLSEEVNQAYYRVL HHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EENLPDEIASGEIEDILSRQMTLLKQRELHRQGKQIRESSSKGDHQMALEALERFIAEKR HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KME CCC >Mature Secondary Structure GFLWGGDGLAIDKEMISQIKHNVNIVDVIGEVVHLSRTGRHYLGLCPFHKEKTPSFNVI CEEECCCCCEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEE EDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIVADKAGMAVTIAPSQASLGQKQHPH CCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHCCCCCCCH QALIDLHEDAAKFYHAVLMTTKIGQRAKEYLYQRGLDDQLIEHFRIGLAPNEMDYLYQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH SKKYTEAQLTASGLFHVSEQSNAVYDAFRHRIMFPLCDDKGNMIAFSGRIWAREDIEKQQ HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHEECEEECCCCCEEEEECCCCCHHHHHHHH AKYKNSRATVLFNKSYELYHLDKAKPIIAKTHEVFLMEGFMDVIAAYRAGYGNAIASMGT HHHCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC ALTPEHVRHLKQLTQRVILTYDGDDAGQNAIAKSLELLTDFQVEIVKIPNRMDPDEFVQQ CCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHC HSPEALAKLLQHSRISSVEFLIDHLKPENMDNLQSQIAYVEHISQIIAQAPSITAQNSYI CCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH NKVADLLPDFDYFQVEQSVNALRLQDRQSLQGQTSQSKASLVTLPINKSMTALAKTESHL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHH LHRLLHHDYLLNEFRHRPDFYFDTPALQTLYEQLKATGQITSYDLSQLSEEVNQAYYRVL HHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EENLPDEIASGEIEDILSRQMTLLKQRELHRQGKQIRESSSKGDHQMALEALERFIAEKR HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KME CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471; 7765979; 7503808 [H]