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The map label for this gene is agaC [H]

Identifier: 195977875

GI number: 195977875

Start: 776199

End: 777080

Strand: Direct

Name: agaC [H]

Synonym: Sez_0743

Alternate gene names: 195977875

Gene position: 776199-777080 (Clockwise)

Preceding gene: 195977874

Following gene: 195977876

Centisome position: 38.35

GC content: 45.01

Gene sequence:

>882_bases
ATGATTCAATGGTGGCAAATCCTATTATTAACACTCTACTCAGCTTATCAAATATTAGATGAGCTAACAATTGTCTCTTC
TGCAGGCTCACCTGTATTTGCAGGATTTATTTCAGGTATTATTATGGGAGATGTGCAAACCGGTCTTTGGATTGGTGGTA
GCCTTCAATTGATGGTGCTTGGTGTTGGGACCTTTGGAGGAGCTTCGCGTATCGATGCAACCTCTGGTGCGGTTATTGCG
ACAGCCTTCTCGGTTGCTCAAGGCATAGAGCCAGAATTAGCGATTTCAACCATTGCAGTTCCGGTAGCGGCCTTGCTGGT
TTATACTGATATTCTAGGACGCTTTTCAACGACCTTCTTTGCTCACCGTATTGACCGCCATGTTGAAAACTTTAACTACC
GAGGCATCGAGCGTGATTACCTTATGGGAGCTGTACCTTGGGCCCTATCACGTGCTCTGCCGGTATTTTTAGCGGTCTCT
TTAGGTGGTGGTGCGGTTGATACAGTTGTTAAGTTCATTGACCATTATGAATGGCTAGCAAATGGTCTAACTCTTGCAGG
AAAAATGCTTCCAGGCTTGGGCTTTGCGATCTTGCTTCACTACCTACCAGTTAAACGTAATCTCCATTATCTGGCTTTAG
GTTTTGGCTTGACAGCAATGCTAACAACCATTTATACCAACCTTCAGGTAGCTGGAGGCGCCCTTGCAGGAGTAGCCAAG
GATTTCAATGCCGCACCATTCAAGGGGCTGCCAATGATTGGTATTGCTATTATTGGACTTGCCTTGGCAACCCTCCATTA
TAAAAATGGTCAACAAGCACCTGTAGCTGAACAAAAACCTGGGGTATCAGAAAGTGGGGAAATTGAAGATGACGAAATCT
AA

Upstream 100 bases:

>100_bases
GGTCCCAAGTGATGCCCCAGCAGACTTTATGCCGCTTTTGGATAAGGTTGATTAAGATGTGTCAAATCAAAAACGAATCT
GTTTCAGGAGGTAAAAGCGT

Downstream 100 bases:

>100_bases
TTATAAATTAACCAAACAGGATTTTAATCAAATCAATAAGCGCAGCCTGTTCACATTCCAATGGGGCTGGAACTACGAGC
GTATGCAGGGCTCTAGCTAT

Product: PTS system mannose/fructose permease IIC component

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIQWWQILLLTLYSAYQILDELTIVSSAGSPVFAGFISGIIMGDVQTGLWIGGSLQLMVLGVGTFGGASRIDATSGAVIA
TAFSVAQGIEPELAISTIAVPVAALLVYTDILGRFSTTFFAHRIDRHVENFNYRGIERDYLMGAVPWALSRALPVFLAVS
LGGGAVDTVVKFIDHYEWLANGLTLAGKMLPGLGFAILLHYLPVKRNLHYLALGFGLTAMLTTIYTNLQVAGGALAGVAK
DFNAAPFKGLPMIGIAIIGLALATLHYKNGQQAPVAEQKPGVSESGEIEDDEI

Sequences:

>Translated_293_residues
MIQWWQILLLTLYSAYQILDELTIVSSAGSPVFAGFISGIIMGDVQTGLWIGGSLQLMVLGVGTFGGASRIDATSGAVIA
TAFSVAQGIEPELAISTIAVPVAALLVYTDILGRFSTTFFAHRIDRHVENFNYRGIERDYLMGAVPWALSRALPVFLAVS
LGGGAVDTVVKFIDHYEWLANGLTLAGKMLPGLGFAILLHYLPVKRNLHYLALGFGLTAMLTTIYTNLQVAGGALAGVAK
DFNAAPFKGLPMIGIAIIGLALATLHYKNGQQAPVAEQKPGVSESGEIEDDEI
>Mature_293_residues
MIQWWQILLLTLYSAYQILDELTIVSSAGSPVFAGFISGIIMGDVQTGLWIGGSLQLMVLGVGTFGGASRIDATSGAVIA
TAFSVAQGIEPELAISTIAVPVAALLVYTDILGRFSTTFFAHRIDRHVENFNYRGIERDYLMGAVPWALSRALPVFLAVS
LGGGAVDTVVKFIDHYEWLANGLTLAGKMLPGLGFAILLHYLPVKRNLHYLALGFGLTAMLTTIYTNLQVAGGALAGVAK
DFNAAPFKGLPMIGIAIIGLALATLHYKNGQQAPVAEQKPGVSESGEIEDDEI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=260, Percent_Identity=24.2307692307692, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788121, Length=217, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 31127; Mature: 31127

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQWWQILLLTLYSAYQILDELTIVSSAGSPVFAGFISGIIMGDVQTGLWIGGSLQLMVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEE
GVGTFGGASRIDATSGAVIATAFSVAQGIEPELAISTIAVPVAALLVYTDILGRFSTTFF
EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHRIDRHVENFNYRGIERDYLMGAVPWALSRALPVFLAVSLGGGAVDTVVKFIDHYEWLA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH
NGLTLAGKMLPGLGFAILLHYLPVKRNLHYLALGFGLTAMLTTIYTNLQVAGGALAGVAK
CCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DFNAAPFKGLPMIGIAIIGLALATLHYKNGQQAPVAEQKPGVSESGEIEDDEI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIQWWQILLLTLYSAYQILDELTIVSSAGSPVFAGFISGIIMGDVQTGLWIGGSLQLMVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEE
GVGTFGGASRIDATSGAVIATAFSVAQGIEPELAISTIAVPVAALLVYTDILGRFSTTFF
EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHRIDRHVENFNYRGIERDYLMGAVPWALSRALPVFLAVSLGGGAVDTVVKFIDHYEWLA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH
NGLTLAGKMLPGLGFAILLHYLPVKRNLHYLALGFGLTAMLTTIYTNLQVAGGALAGVAK
CCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DFNAAPFKGLPMIGIAIIGLALATLHYKNGQQAPVAEQKPGVSESGEIEDDEI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]