| Definition | Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome. |
|---|---|
| Accession | NC_011134 |
| Length | 2,024,171 |
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The map label for this gene is dinG [H]
Identifier: 195977857
GI number: 195977857
Start: 755230
End: 757695
Strand: Direct
Name: dinG [H]
Synonym: Sez_0725
Alternate gene names: 195977857
Gene position: 755230-757695 (Clockwise)
Preceding gene: 195977855
Following gene: 195977858
Centisome position: 37.31
GC content: 45.09
Gene sequence:
>2466_bases ATGATCAATGAGTTTTCACAAAAATATGCTGTGATTGACCTCGAAGCCACAAGCCCAGGTCCAACAGCGTCTATCATTCA GGTTGGCATTGTGATTATTGAGGGAAAAGAAATAGTTGATTCGTATCAAACTGATGTTAATCCTCATGAGCCCTTGTCAG ACCATATCAAGGCACTCACAGGTATTACAGACCAGCAGCTAGCTCAGGCACCGGACTTCTCACAGGTAGCAAGAACCATT TTTGAGTTGATTGAGGACTGTGTTTTTGTTGCTCATAATGTCACCTTTGATGCCAATTTGTTGGCAGAAGCTTTGTTTTT GGAGGGCTATGACCTCCTCACTCCTAGAGTGGATACTGTTGAGCTGGCTCAGATTTTTTACCCCAGCCTAGAAAAATACA GCCTTAGCCACCTATCAGAGGTGCTAGACCTAAACCTATCTGATGCTCATACCGCTATTGCTGATGCTCAGGCGACTGCT AACTTATTTATCAAGCTGCTTCACAAGATAGAGAGCTTACCAAGAGAATGCTTGGAGACTCTTTTGCTGTATGCTGATAG TCTGTTATGTGAGACAGCTATGATTGTGAGACAAGCCCTTGCAGTCAGTCGGCCTTATGCTTCAAGTGACTACATCAAGA TTAATCAGATCTTGCTAAAAAAGTCGGCTCAGCCAGCAAAGCCCTATCAATTGTCCCAGTCCTTTGAGATTAACGCTGCC CTCTTAGCGCTTGAGGAGCGCCCTAAGCAGCTCAGCTTTGCAAAGATCGTCGAAGAGACCCTTTCTCAGGGAGGGGCAAC CTTTATTGAGGCTCAGGCAGGTATTGGTAAAACCTATGGCTACTTACTGCCCCTCCTTGCACAGAAGCATCAGACCCAAA TCTTGGTTAGTGTGCCAACCAAGCTGCTACAGGACCAAATCATGGCTAATGAGGTGAGGGCTATTCAGGAGCAGTTTCAC ATTGATTGCCATAGTATCAAGGGGCCTGCTAATTACATCAAGCTAGACAGCTTTCAAGAGAGCCTTAATCGGTTTGATGA CAACCGCTTGGTTAATCGCTATAAAATGCAATTGCTGGTTTGGCTTTTGGAAACAAGGACTGGTGATTTAGATGAAATTA AGCAAAAGCAACGGTATGCAGCTTATTTTGACCAGATCAAGCATGATGGCAGTATCCAGCAGACCTCGCCCTTTTACGCT TATGATTTTTGGCAAAAAAACTATCAAAAAGCTAAGTCAGCTCGCCTGCTGATCACCAATCATGCCTATTTTTTACACCG TATTCAGGACGATAAGGCCTTTGCTAAGGGCAAGATCTTAGTCTTTGATGAAGCCCAGGCCTTAATGCTGCAGCTAGAGG AGCTAGCCCATCAGCGACTAAATATAGCTGATACGCTCCAAGAGCTTCAAGAGCAGCTAGCTGCGCCAAACAGCTTACTT GAACAACGCTTGTTAGAAGGCATTGCCTTTGAGCTCAATCAATTAAGCAATCACTATCATCAGGAAGAGCAGCAAGCCCA AGGCTCACAGCATTTACTGCGGCTGCAAGAGCATGTCAAGGAGCTAGGTGCTGCAGCCTCTCAGAGCCTCAAACAGCTTT TCCAGCAGCAGGAAATGGATTATTGGGTTAGCAGTGAGCAGCAGGCTGACAAGCGCCAAACCTTTTTAAATGGCAGCAGC AGGGCGGTTCTTCAGTTTAGCTCACTGTTGCCTGAGGTCTTTAAGGCTTACTTTGTCTCAGCTACTCTACAGATTAGCCC TAGCATTAGCTTGGCTGATTTATTGGGCTTTGACACTTATTCTTATCATCAGCTGGCTAAGGAGAAGACCACTCAGCAAT TGGTTGTCATTGATCAGGACATGCCCTTGATTAAGGACTTGACTGATGAGGCCTACACACAGACCATAGCAGCAAGGCTA TTAGTGCTTCATCAGCAACAGCAGGTACCTATCTTAGTGCTCTTTAATGCTAAAAAGCACATGCTCATGGTTTCTGACTA TTTAGAGGCTAATCAGGTGCAGCACTTGACACAAGGCAAAAACGGTACAGCCTATCACATCAAAAAGCGCTTTGATCGTG GTGAGCAATCAATGCTGCTGGGGCTTGCAGCCTTTTGGGAGGGAGTTGACTTTGTTCATGCTGATCGCATGATAGAGGTC ATTACCCGCCTGCCCTTTGATAATCCAGAAGATATTGCCACTCAAAAAATGCAGCGCTACCTACAGGCAGCAGGCAAGCA GCCCTTTAATGATTATTTTCTGCCGATGACGATCTTAAGATTAAAGCAGGCGATTGGTCGAACCCTGCGTCGAAAAGAGC AGAAATCAGCAGTTTTGATCTTAGATCGTCGCATTCTGACCATGTCCTATGGTCAGACCATTTTGCACAGCCTAGAAGAG GAATTCCTGATATCACAACAAAATTTCCATGATAGTCTAGCAGAAATAGGCGATTTTTTGATATAA
Upstream 100 bases:
>100_bases CCCTTTATGATACTGACTGGCCCTATTGAGCTGAGCTAAGGGTGGGCATTGTCAGATTTAGGCAAAGCCTGTCACAAAAC GTGCTATAATAGATAGTACT
Downstream 100 bases:
>100_bases TAGGAAAGATCATATGCAAAGGAGCTGAAATTGGACAAGCACACAAGGCTCAAAACAGTTTTATATCAATGTGCCAGCTT GGTCGTACTGCTTTGTCTTG
Product: bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 821; Mature: 821
Protein sequence:
>821_residues MINEFSQKYAVIDLEATSPGPTASIIQVGIVIIEGKEIVDSYQTDVNPHEPLSDHIKALTGITDQQLAQAPDFSQVARTI FELIEDCVFVAHNVTFDANLLAEALFLEGYDLLTPRVDTVELAQIFYPSLEKYSLSHLSEVLDLNLSDAHTAIADAQATA NLFIKLLHKIESLPRECLETLLLYADSLLCETAMIVRQALAVSRPYASSDYIKINQILLKKSAQPAKPYQLSQSFEINAA LLALEERPKQLSFAKIVEETLSQGGATFIEAQAGIGKTYGYLLPLLAQKHQTQILVSVPTKLLQDQIMANEVRAIQEQFH IDCHSIKGPANYIKLDSFQESLNRFDDNRLVNRYKMQLLVWLLETRTGDLDEIKQKQRYAAYFDQIKHDGSIQQTSPFYA YDFWQKNYQKAKSARLLITNHAYFLHRIQDDKAFAKGKILVFDEAQALMLQLEELAHQRLNIADTLQELQEQLAAPNSLL EQRLLEGIAFELNQLSNHYHQEEQQAQGSQHLLRLQEHVKELGAAASQSLKQLFQQQEMDYWVSSEQQADKRQTFLNGSS RAVLQFSSLLPEVFKAYFVSATLQISPSISLADLLGFDTYSYHQLAKEKTTQQLVVIDQDMPLIKDLTDEAYTQTIAARL LVLHQQQQVPILVLFNAKKHMLMVSDYLEANQVQHLTQGKNGTAYHIKKRFDRGEQSMLLGLAAFWEGVDFVHADRMIEV ITRLPFDNPEDIATQKMQRYLQAAGKQPFNDYFLPMTILRLKQAIGRTLRRKEQKSAVLILDRRILTMSYGQTILHSLEE EFLISQQNFHDSLAEIGDFLI
Sequences:
>Translated_821_residues MINEFSQKYAVIDLEATSPGPTASIIQVGIVIIEGKEIVDSYQTDVNPHEPLSDHIKALTGITDQQLAQAPDFSQVARTI FELIEDCVFVAHNVTFDANLLAEALFLEGYDLLTPRVDTVELAQIFYPSLEKYSLSHLSEVLDLNLSDAHTAIADAQATA NLFIKLLHKIESLPRECLETLLLYADSLLCETAMIVRQALAVSRPYASSDYIKINQILLKKSAQPAKPYQLSQSFEINAA LLALEERPKQLSFAKIVEETLSQGGATFIEAQAGIGKTYGYLLPLLAQKHQTQILVSVPTKLLQDQIMANEVRAIQEQFH IDCHSIKGPANYIKLDSFQESLNRFDDNRLVNRYKMQLLVWLLETRTGDLDEIKQKQRYAAYFDQIKHDGSIQQTSPFYA YDFWQKNYQKAKSARLLITNHAYFLHRIQDDKAFAKGKILVFDEAQALMLQLEELAHQRLNIADTLQELQEQLAAPNSLL EQRLLEGIAFELNQLSNHYHQEEQQAQGSQHLLRLQEHVKELGAAASQSLKQLFQQQEMDYWVSSEQQADKRQTFLNGSS RAVLQFSSLLPEVFKAYFVSATLQISPSISLADLLGFDTYSYHQLAKEKTTQQLVVIDQDMPLIKDLTDEAYTQTIAARL LVLHQQQQVPILVLFNAKKHMLMVSDYLEANQVQHLTQGKNGTAYHIKKRFDRGEQSMLLGLAAFWEGVDFVHADRMIEV ITRLPFDNPEDIATQKMQRYLQAAGKQPFNDYFLPMTILRLKQAIGRTLRRKEQKSAVLILDRRILTMSYGQTILHSLEE EFLISQQNFHDSLAEIGDFLI >Mature_821_residues MINEFSQKYAVIDLEATSPGPTASIIQVGIVIIEGKEIVDSYQTDVNPHEPLSDHIKALTGITDQQLAQAPDFSQVARTI FELIEDCVFVAHNVTFDANLLAEALFLEGYDLLTPRVDTVELAQIFYPSLEKYSLSHLSEVLDLNLSDAHTAIADAQATA NLFIKLLHKIESLPRECLETLLLYADSLLCETAMIVRQALAVSRPYASSDYIKINQILLKKSAQPAKPYQLSQSFEINAA LLALEERPKQLSFAKIVEETLSQGGATFIEAQAGIGKTYGYLLPLLAQKHQTQILVSVPTKLLQDQIMANEVRAIQEQFH IDCHSIKGPANYIKLDSFQESLNRFDDNRLVNRYKMQLLVWLLETRTGDLDEIKQKQRYAAYFDQIKHDGSIQQTSPFYA YDFWQKNYQKAKSARLLITNHAYFLHRIQDDKAFAKGKILVFDEAQALMLQLEELAHQRLNIADTLQELQEQLAAPNSLL EQRLLEGIAFELNQLSNHYHQEEQQAQGSQHLLRLQEHVKELGAAASQSLKQLFQQQEMDYWVSSEQQADKRQTFLNGSS RAVLQFSSLLPEVFKAYFVSATLQISPSISLADLLGFDTYSYHQLAKEKTTQQLVVIDQDMPLIKDLTDEAYTQTIAARL LVLHQQQQVPILVLFNAKKHMLMVSDYLEANQVQHLTQGKNGTAYHIKKRFDRGEQSMLLGLAAFWEGVDFVHADRMIEV ITRLPFDNPEDIATQKMQRYLQAAGKQPFNDYFLPMTILRLKQAIGRTLRRKEQKSAVLILDRRILTMSYGQTILHSLEE EFLISQQNFHDSLAEIGDFLI
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=159, Percent_Identity=28.3018867924528, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787018, Length=164, Percent_Identity=30.4878048780488, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR006054 - InterPro: IPR006310 - InterPro: IPR006055 - InterPro: IPR013520 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR006935 - InterPro: IPR012337 [H]
Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 93466; Mature: 93466
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINEFSQKYAVIDLEATSPGPTASIIQVGIVIIEGKEIVDSYQTDVNPHEPLSDHIKALT CCCCCCCCEEEEEEECCCCCCCHHHHEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHH GITDQQLAQAPDFSQVARTIFELIEDCVFVAHNVTFDANLLAEALFLEGYDLLTPRVDTV CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCHH ELAQIFYPSLEKYSLSHLSEVLDLNLSDAHTAIADAQATANLFIKLLHKIESLPRECLET HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLYADSLLCETAMIVRQALAVSRPYASSDYIKINQILLKKSAQPAKPYQLSQSFEINAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCHHHH LLALEERPKQLSFAKIVEETLSQGGATFIEAQAGIGKTYGYLLPLLAQKHQTQILVSVPT HHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEHHHH KLLQDQIMANEVRAIQEQFHIDCHSIKGPANYIKLDSFQESLNRFDDNRLVNRYKMQLLV HHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHH WLLETRTGDLDEIKQKQRYAAYFDQIKHDGSIQQTSPFYAYDFWQKNYQKAKSARLLITN HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC HAYFLHRIQDDKAFAKGKILVFDEAQALMLQLEELAHQRLNIADTLQELQEQLAAPNSLL CHHHHHHHCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH EQRLLEGIAFELNQLSNHYHQEEQQAQGSQHLLRLQEHVKELGAAASQSLKQLFQQQEMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWVSSEQQADKRQTFLNGSSRAVLQFSSLLPEVFKAYFVSATLQISPSISLADLLGFDTY HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCH SYHQLAKEKTTQQLVVIDQDMPLIKDLTDEAYTQTIAARLLVLHQQQQVPILVLFNAKKH HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC MLMVSDYLEANQVQHLTQGKNGTAYHIKKRFDRGEQSMLLGLAAFWEGVDFVHADRMIEV EEEHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH ITRLPFDNPEDIATQKMQRYLQAAGKQPFNDYFLPMTILRLKQAIGRTLRRKEQKSAVLI HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE LDRRILTMSYGQTILHSLEEEFLISQQNFHDSLAEIGDFLI ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINEFSQKYAVIDLEATSPGPTASIIQVGIVIIEGKEIVDSYQTDVNPHEPLSDHIKALT CCCCCCCCEEEEEEECCCCCCCHHHHEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHH GITDQQLAQAPDFSQVARTIFELIEDCVFVAHNVTFDANLLAEALFLEGYDLLTPRVDTV CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCHH ELAQIFYPSLEKYSLSHLSEVLDLNLSDAHTAIADAQATANLFIKLLHKIESLPRECLET HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLYADSLLCETAMIVRQALAVSRPYASSDYIKINQILLKKSAQPAKPYQLSQSFEINAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCHHHH LLALEERPKQLSFAKIVEETLSQGGATFIEAQAGIGKTYGYLLPLLAQKHQTQILVSVPT HHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEHHHH KLLQDQIMANEVRAIQEQFHIDCHSIKGPANYIKLDSFQESLNRFDDNRLVNRYKMQLLV HHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHH WLLETRTGDLDEIKQKQRYAAYFDQIKHDGSIQQTSPFYAYDFWQKNYQKAKSARLLITN HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC HAYFLHRIQDDKAFAKGKILVFDEAQALMLQLEELAHQRLNIADTLQELQEQLAAPNSLL CHHHHHHHCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH EQRLLEGIAFELNQLSNHYHQEEQQAQGSQHLLRLQEHVKELGAAASQSLKQLFQQQEMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWVSSEQQADKRQTFLNGSSRAVLQFSSLLPEVFKAYFVSATLQISPSISLADLLGFDTY HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCH SYHQLAKEKTTQQLVVIDQDMPLIKDLTDEAYTQTIAARLLVLHQQQQVPILVLFNAKKH HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC MLMVSDYLEANQVQHLTQGKNGTAYHIKKRFDRGEQSMLLGLAAFWEGVDFVHADRMIEV EEEHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH ITRLPFDNPEDIATQKMQRYLQAAGKQPFNDYFLPMTILRLKQAIGRTLRRKEQKSAVLI HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE LDRRILTMSYGQTILHSLEEEFLISQQNFHDSLAEIGDFLI ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]