Click here to switch to the map view.

The map label for this gene is sagD

Identifier: 195977634

GI number: 195977634

Start: 512028

End: 513386

Strand: Direct

Name: sagD

Synonym: Sez_0493

Alternate gene names: NA

Gene position: 512028-513386 (Clockwise)

Preceding gene: 195977633

Following gene: 195977635

Centisome position: 25.3

GC content: 41.57

Gene sequence:

>1359_bases
ATGCTACATTATTACCCTTCGTTCAACCATATCCTTGATAAGCTAAAGGGCCTTAGTGGTAACCGAACTGGTATCTTAAA
TCAGTCTCAGGTTCCTATTTGTAACCATCCTCATGATGTTTACCTAAAGAGTGTGACAGGTCAGATGCCTGATTACCACA
AGCAGTTTATTGGTGAGCTGAGTCAGGTGAGCTATCATATCATCGGTTATGGCAGTCATTATGAGGAGGCCTTGATCAAA
TACTTAGGTGAAAGCATTGAGCGTTATGCCACTGTTATTGCTGGGGAATTATTATCAGACCGGATTGTTTATGCTTCTTA
TAGAGAATTGAGCCAGACAGATCCTGTCATGCCCTTAGAGTATTTGCAGGTTTTTACACAGGAACAAATTGACCGTTGTC
ATGATTTGCACATGATCATGTGTGATAAAATGGTGACACAAGACGATGTCTTGGGCTGGGTTAAGTGTCCGATGTTTTTT
GAAGATAAGGAGATGTATGTGCCTGCCCAAATGCTTTGCGTTGGCTATAAGACCAATCAGGCTGTAGGCGAAAAGCACAT
CATTCCAGGTTTTTCAACGGGGACAGCCTCTCATACAACGCTAGAAGCAGCCATGTGTAATAGCTTGATTGAGTATATTC
AAATCGACTCTATGATGCTTAGCTGGCATACTAAAAAGCCTTGTCCCAGAGTGATTATTGATGATCCGGAAATTCTAGCT
CTTTTGGAGGAGGCTAGACTTGGTAAGGACAGTCTTTATGAGATTATCCCTATTGACATGACTGTTGGAGAAGATAATCC
GCTTTATACCTTTGGTATTATCCTCAAAAACAAATACAAGGAAGGTCCTTATCTCTTATTTGGGGTTCAGGCAGGCTTGG
ATCCTAAGCATACCCTGTTAAGAGGAATCATGGAAGCTTCAGCTATTAGCTATAGCTATTACTATAATTTGTTTTATAAT
CCAACGTCAACACAAAATGCTGAGAGTGACTCTCCCTTGTTCTTAGACCTAGATAGTAACGTCTTTTACTATGCTCATCC
AAAGGACCAGGAGCTTAAATGGAAGGCCTTTGAGCCCTTGATTTCAGGAGAGGTTCGTCTTAGTGACCTGACAAACCATG
CTGGGAAAGATAAAAAAGAGGATTTAAAGACACTACTAGCCTACACTAAAAAAGTAAGTCCTAATGCTGTCTTTTTAGAC
ATTACTCCTCCTGAGGCTTCAGAAAAAGGCTGGTACGTGACACGTGTCCTCACTCCTGAGCTTCTTGAGATGTGCATTCC
TGCCTTTCCATTTGCTAATCATCCACGCATGAGACAGTTTGGAGGTGTGACAAATGCCTTTGTACACCCAATGCCTTAA

Upstream 100 bases:

>100_bases
ACAAGGGGCTCTGGCAAAATTAAGGTATGAGGATCAACAGATTTCAACACGTGAGATTGTTAAAAAACTCCTTCAAGAAG
AGTCATAAGGAGGTCTAACA

Downstream 100 bases:

>100_bases
CCTATGCTTTTTAATGGCTACCTTTTGTCCTTCGATCGCGATGCAGGCTATTTTTGGCCAGGGTCGTGATAGCTATAGCT
TTAATCTAATAGGCTTTTTA

Product: Streptolysin S biosynthesis protein SagD

Products: NA

Alternate protein names: Streptolysin S Biosynthesis Protein; Streptolysin S Biosynthesis Protein D; YcaO-Like Protein

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MLHYYPSFNHILDKLKGLSGNRTGILNQSQVPICNHPHDVYLKSVTGQMPDYHKQFIGELSQVSYHIIGYGSHYEEALIK
YLGESIERYATVIAGELLSDRIVYASYRELSQTDPVMPLEYLQVFTQEQIDRCHDLHMIMCDKMVTQDDVLGWVKCPMFF
EDKEMYVPAQMLCVGYKTNQAVGEKHIIPGFSTGTASHTTLEAAMCNSLIEYIQIDSMMLSWHTKKPCPRVIIDDPEILA
LLEEARLGKDSLYEIIPIDMTVGEDNPLYTFGIILKNKYKEGPYLLFGVQAGLDPKHTLLRGIMEASAISYSYYYNLFYN
PTSTQNAESDSPLFLDLDSNVFYYAHPKDQELKWKAFEPLISGEVRLSDLTNHAGKDKKEDLKTLLAYTKKVSPNAVFLD
ITPPEASEKGWYVTRVLTPELLEMCIPAFPFANHPRMRQFGGVTNAFVHPMP

Sequences:

>Translated_452_residues
MLHYYPSFNHILDKLKGLSGNRTGILNQSQVPICNHPHDVYLKSVTGQMPDYHKQFIGELSQVSYHIIGYGSHYEEALIK
YLGESIERYATVIAGELLSDRIVYASYRELSQTDPVMPLEYLQVFTQEQIDRCHDLHMIMCDKMVTQDDVLGWVKCPMFF
EDKEMYVPAQMLCVGYKTNQAVGEKHIIPGFSTGTASHTTLEAAMCNSLIEYIQIDSMMLSWHTKKPCPRVIIDDPEILA
LLEEARLGKDSLYEIIPIDMTVGEDNPLYTFGIILKNKYKEGPYLLFGVQAGLDPKHTLLRGIMEASAISYSYYYNLFYN
PTSTQNAESDSPLFLDLDSNVFYYAHPKDQELKWKAFEPLISGEVRLSDLTNHAGKDKKEDLKTLLAYTKKVSPNAVFLD
ITPPEASEKGWYVTRVLTPELLEMCIPAFPFANHPRMRQFGGVTNAFVHPMP
>Mature_452_residues
MLHYYPSFNHILDKLKGLSGNRTGILNQSQVPICNHPHDVYLKSVTGQMPDYHKQFIGELSQVSYHIIGYGSHYEEALIK
YLGESIERYATVIAGELLSDRIVYASYRELSQTDPVMPLEYLQVFTQEQIDRCHDLHMIMCDKMVTQDDVLGWVKCPMFF
EDKEMYVPAQMLCVGYKTNQAVGEKHIIPGFSTGTASHTTLEAAMCNSLIEYIQIDSMMLSWHTKKPCPRVIIDDPEILA
LLEEARLGKDSLYEIIPIDMTVGEDNPLYTFGIILKNKYKEGPYLLFGVQAGLDPKHTLLRGIMEASAISYSYYYNLFYN
PTSTQNAESDSPLFLDLDSNVFYYAHPKDQELKWKAFEPLISGEVRLSDLTNHAGKDKKEDLKTLLAYTKKVSPNAVFLD
ITPPEASEKGWYVTRVLTPELLEMCIPAFPFANHPRMRQFGGVTNAFVHPMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51488; Mature: 51488

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHYYPSFNHILDKLKGLSGNRTGILNQSQVPICNHPHDVYLKSVTGQMPDYHKQFIGEL
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHCCCCCHHHHHHHHHH
SQVSYHIIGYGSHYEEALIKYLGESIERYATVIAGELLSDRIVYASYRELSQTDPVMPLE
HHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
YLQVFTQEQIDRCHDLHMIMCDKMVTQDDVLGWVKCPMFFEDKEMYVPAQMLCVGYKTNQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCEEECCCCCCCCHHHEEEECCCCC
AVGEKHIIPGFSTGTASHTTLEAAMCNSLIEYIQIDSMMLSWHTKKPCPRVIIDDPEILA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCHHHHH
LLEEARLGKDSLYEIIPIDMTVGEDNPLYTFGIILKNKYKEGPYLLFGVQAGLDPKHTLL
HHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHH
RGIMEASAISYSYYYNLFYNPTSTQNAESDSPLFLDLDSNVFYYAHPKDQELKWKAFEPL
HHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHCHH
ISGEVRLSDLTNHAGKDKKEDLKTLLAYTKKVSPNAVFLDITPPEASEKGWYVTRVLTPE
HCCCEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHH
LLEMCIPAFPFANHPRMRQFGGVTNAFVHPMP
HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLHYYPSFNHILDKLKGLSGNRTGILNQSQVPICNHPHDVYLKSVTGQMPDYHKQFIGEL
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHCCCCCHHHHHHHHHH
SQVSYHIIGYGSHYEEALIKYLGESIERYATVIAGELLSDRIVYASYRELSQTDPVMPLE
HHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
YLQVFTQEQIDRCHDLHMIMCDKMVTQDDVLGWVKCPMFFEDKEMYVPAQMLCVGYKTNQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCEEECCCCCCCCHHHEEEECCCCC
AVGEKHIIPGFSTGTASHTTLEAAMCNSLIEYIQIDSMMLSWHTKKPCPRVIIDDPEILA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCHHHHH
LLEEARLGKDSLYEIIPIDMTVGEDNPLYTFGIILKNKYKEGPYLLFGVQAGLDPKHTLL
HHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHH
RGIMEASAISYSYYYNLFYNPTSTQNAESDSPLFLDLDSNVFYYAHPKDQELKWKAFEPL
HHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHCHH
ISGEVRLSDLTNHAGKDKKEDLKTLLAYTKKVSPNAVFLDITPPEASEKGWYVTRVLTPE
HCCCEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHH
LLEMCIPAFPFANHPRMRQFGGVTNAFVHPMP
HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA