Click here to switch to the map view.

The map label for this gene is lacD [H]

Identifier: 195977597

GI number: 195977597

Start: 478761

End: 479753

Strand: Direct

Name: lacD [H]

Synonym: Sez_0456

Alternate gene names: 195977597

Gene position: 478761-479753 (Clockwise)

Preceding gene: 195977596

Following gene: 195977598

Centisome position: 23.65

GC content: 49.85

Gene sequence:

>993_bases
ATGACATTAACAAGAAACAAAAAAGCTTATTTAGAAAAGGTCAGTCGTAAGGGAATCATTTCGGCCTTGGCTTTTGATCA
GCGCGGGGCTTTAAAACGCATGATGGCAGCCCACCAAGACATAGAGCCTGCTCCTTGGCAAATCGAGGCCCTAAAGGCTC
TGGTATCAGAGGAGCTAACCCCCTATGCCTCCTCTATCCTGCTTGACCCTGAATATGGCCTGCCAGCCACCAAGGTGCGT
GATGAGAGGTCTGGCTTATTATTAGCCTATGAGCAGACCGGCTATGACACAACCACCACTAGCCGCCTGCCAGATTGTCT
GGTGGACTGGTCAGTCAAGCGCCTCAAGGAGGCCGGAGCTGACGCAGTGAAGTTCTTGCTGTACTATGATGTTGATGGTG
ATGAGCGTATTAACCAACAAAAGCAGGCCTATATCGAGCGTATCGGCTCAGAATGTCAGGCAGAGGAGATACCATTTTTC
CTTGAGCTGTTGACCTATGATGAGGCGATAACAGACAATCAGAGTGTAGCCTTTGCCAAGCTAAAGGCACACAAGGTTAA
TGAGGCCATGAAGGTCTTTTCAGCTGAGCGCTTTGGGGTTGATGTCCTAAAGGTAGAGGTTCCTGTCAATATGGCCTATG
TTGAGGGCTTTGCAGAGGGTGAGGCTGTTTACAGCAAAGAGGAGGCTATTCAAGCCTTTCGTGATCAAGAGTCTGCTAGT
CATTTGCCATATATTTATTTGAGTGCGGGTGTATCAGCTAGTCTGTTTCAAGAGACCTTGGTTTTTGCGGCAGAGGCAGG
AGCTAGGTTTAATGGAGTGCTGTGTGGTCGGGCTACCTGGTCAGGAGCAGTAGCGGTGTACATGTCAGAGGGCGAGGAGG
CAGCGCGTCAATGGCTTCGCACAGAGGGCTTTCAGAATATTGATCGCCTAAACCAGGTGCTTGAGCGAACAGCCAGCCCT
TGGACGACAAAGCTTACTGTTGATGAAGCCTAG

Upstream 100 bases:

>100_bases
GCTCTAGGCATGCTAAATGCGCAAGAAGCCATAACAGGCCATGTGAATATGGCACATTTTGATGAGTTATTTGATCGTAT
TCAAGTAGAAGAGGTATAAG

Downstream 100 bases:

>100_bases
TAAAGGCGTAATAAAAGCAATGCCAGGACATTGCTGTGACAGTAACAGCCTATCCTAATCAAATGGTAGGACTTTTCCAA
GAAGCTGAGGCTGCATTAGC

Product: tagatose 1,6-diphosphate aldolase

Products: NA

Alternate protein names: D-tagatose-1,6-bisphosphate aldolase 1; Tagatose-bisphosphate aldolase 1 [H]

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTLTRNKKAYLEKVSRKGIISALAFDQRGALKRMMAAHQDIEPAPWQIEALKALVSEELTPYASSILLDPEYGLPATKVR
DERSGLLLAYEQTGYDTTTTSRLPDCLVDWSVKRLKEAGADAVKFLLYYDVDGDERINQQKQAYIERIGSECQAEEIPFF
LELLTYDEAITDNQSVAFAKLKAHKVNEAMKVFSAERFGVDVLKVEVPVNMAYVEGFAEGEAVYSKEEAIQAFRDQESAS
HLPYIYLSAGVSASLFQETLVFAAEAGARFNGVLCGRATWSGAVAVYMSEGEEAARQWLRTEGFQNIDRLNQVLERTASP
WTTKLTVDEA

Sequences:

>Translated_330_residues
MTLTRNKKAYLEKVSRKGIISALAFDQRGALKRMMAAHQDIEPAPWQIEALKALVSEELTPYASSILLDPEYGLPATKVR
DERSGLLLAYEQTGYDTTTTSRLPDCLVDWSVKRLKEAGADAVKFLLYYDVDGDERINQQKQAYIERIGSECQAEEIPFF
LELLTYDEAITDNQSVAFAKLKAHKVNEAMKVFSAERFGVDVLKVEVPVNMAYVEGFAEGEAVYSKEEAIQAFRDQESAS
HLPYIYLSAGVSASLFQETLVFAAEAGARFNGVLCGRATWSGAVAVYMSEGEEAARQWLRTEGFQNIDRLNQVLERTASP
WTTKLTVDEA
>Mature_329_residues
TLTRNKKAYLEKVSRKGIISALAFDQRGALKRMMAAHQDIEPAPWQIEALKALVSEELTPYASSILLDPEYGLPATKVRD
ERSGLLLAYEQTGYDTTTTSRLPDCLVDWSVKRLKEAGADAVKFLLYYDVDGDERINQQKQAYIERIGSECQAEEIPFFL
ELLTYDEAITDNQSVAFAKLKAHKVNEAMKVFSAERFGVDVLKVEVPVNMAYVEGFAEGEAVYSKEEAIQAFRDQESASH
LPYIYLSAGVSASLFQETLVFAAEAGARFNGVLCGRATWSGAVAVYMSEGEEAARQWLRTEGFQNIDRLNQVLERTASPW
TTKLTVDEA

Specific function: Unknown

COG id: COG3684

COG function: function code G; Tagatose-1,6-bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase lacD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002915
- InterPro:   IPR005927 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.40 [H]

Molecular weight: Translated: 36842; Mature: 36711

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTRNKKAYLEKVSRKGIISALAFDQRGALKRMMAAHQDIEPAPWQIEALKALVSEELT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PYASSILLDPEYGLPATKVRDERSGLLLAYEQTGYDTTTTSRLPDCLVDWSVKRLKEAGA
CHHHHEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCC
DAVKFLLYYDVDGDERINQQKQAYIERIGSECQAEEIPFFLELLTYDEAITDNQSVAFAK
CCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHH
LKAHKVNEAMKVFSAERFGVDVLKVEVPVNMAYVEGFAEGEAVYSKEEAIQAFRDQESAS
HHHHHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
HLPYIYLSAGVSASLFQETLVFAAEAGARFNGVLCGRATWSGAVAVYMSEGEEAARQWLR
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHH
TEGFQNIDRLNQVLERTASPWTTKLTVDEA
HCCCCHHHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure 
TLTRNKKAYLEKVSRKGIISALAFDQRGALKRMMAAHQDIEPAPWQIEALKALVSEELT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PYASSILLDPEYGLPATKVRDERSGLLLAYEQTGYDTTTTSRLPDCLVDWSVKRLKEAGA
CHHHHEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCC
DAVKFLLYYDVDGDERINQQKQAYIERIGSECQAEEIPFFLELLTYDEAITDNQSVAFAK
CCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHH
LKAHKVNEAMKVFSAERFGVDVLKVEVPVNMAYVEGFAEGEAVYSKEEAIQAFRDQESAS
HHHHHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
HLPYIYLSAGVSASLFQETLVFAAEAGARFNGVLCGRATWSGAVAVYMSEGEEAARQWLR
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHH
TEGFQNIDRLNQVLERTASPWTTKLTVDEA
HCCCCHHHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]