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The map label for this gene is rimP

Identifier: 195977580

GI number: 195977580

Start: 463417

End: 463800

Strand: Direct

Name: rimP

Synonym: Sez_0439

Alternate gene names: 195977580

Gene position: 463417-463800 (Clockwise)

Preceding gene: 195977578

Following gene: 195977581

Centisome position: 22.89

GC content: 42.71

Gene sequence:

>384_bases
ATGGGCAGTGATTATGTCCTTAGTATCTTAGTTGATAAGGCTTCTGGGATTACCGTTGAGGATACTGCTGAGCTTACAGA
GCTAATCAGTCCACTCTTAGATACGATTTCTCCAGACCCTTTTCCAGATCAGTATATGCTGGAGGTTTCCAGTCCTGGGC
TAGAGCGTCCTTTAAAGACTGCTGAGAGCTTGAAGGCTGCGGTAGGCTCATATATTAATGTCAGTCTTTATCGGGCAATT
GATAAGGTGAAGGTTTTTCAAGGAGATTTAGTGGCTTTTGATGGCGATATCCTAACCATTGATTATCTAGATAAGACGCG
TCACAAAACAGTTGAGATTCCTTACCAAGCAGTGGCTAAGGCTCGCTTAGCTGTCAAATTATAA

Upstream 100 bases:

>100_bases
TATTAACATCGCAAACACAGCTATTATTGATATTGTTACCCAAACCGTAGAACCTGTAATTAAAGCACCCTATGAATTGG
TCGACATCGAATACGACAAA

Downstream 100 bases:

>100_bases
GGCAATTGCTGAGCGATCTGTCTTAGTCGGTTGGCTAAGCCCTAAATGGATTAATTTATAAGATAAGAAAGGATTTTTAC
CAAGCTTTGAGAGCAAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MGSDYVLSILVDKASGITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPLKTAESLKAAVGSYINVSLYRAI
DKVKVFQGDLVAFDGDILTIDYLDKTRHKTVEIPYQAVAKARLAVKL

Sequences:

>Translated_127_residues
MGSDYVLSILVDKASGITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPLKTAESLKAAVGSYINVSLYRAI
DKVKVFQGDLVAFDGDILTIDYLDKTRHKTVEIPYQAVAKARLAVKL
>Mature_126_residues
GSDYVLSILVDKASGITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPLKTAESLKAAVGSYINVSLYRAID
KVKVFQGDLVAFDGDILTIDYLDKTRHKTVEIPYQAVAKARLAVKL

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=99, Percent_Identity=39.3939393939394, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_STREM (B4U1E4)

Other databases:

- EMBL:   CP001129
- RefSeq:   YP_002122824.1
- EnsemblBacteria:   EBSTRT00000008456
- GeneID:   6760648
- GenomeReviews:   CP001129_GR
- KEGG:   sez:Sez_0439
- GeneTree:   EBGT00050000026925
- HOGENOM:   HBG668072
- OMA:   ISPDPFP
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 13902; Mature: 13771

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSDYVLSILVDKASGITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPLKT
CCCCEEEEEEEECCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH
AESLKAAVGSYINVSLYRAIDKVKVFQGDLVAFDGDILTIDYLDKTRHKTVEIPYQAVAK
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCEEECCHHHHHH
ARLAVKL
HHHEECC
>Mature Secondary Structure 
GSDYVLSILVDKASGITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPLKT
CCCEEEEEEEECCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH
AESLKAAVGSYINVSLYRAIDKVKVFQGDLVAFDGDILTIDYLDKTRHKTVEIPYQAVAK
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCEEECCHHHHHH
ARLAVKL
HHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA