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The map label for this gene is ytmP [H]

Identifier: 195977577

GI number: 195977577

Start: 460509

End: 461300

Strand: Direct

Name: ytmP [H]

Synonym: Sez_0436

Alternate gene names: 195977577

Gene position: 460509-461300 (Clockwise)

Preceding gene: 195977576

Following gene: 195977578

Centisome position: 22.75

GC content: 41.67

Gene sequence:

>792_bases
GTGACAACAACCGAACAGGACCTTGTATTGACTCCCTTGCGCGGAAAGAGTGGCAAAGCCTATAAAGGGACCTATCCAAA
TGGCGAAAGCGTCTTTATCAAGCTTAATACAACACCAATCCTACCTGCCTTAGCAAAGGAACAGATTGCCCCGCAATTGC
TTTGGGCAAAGCGTATGGGTAATGGCGATATGATGAGCGCTCAAGAGTGGCTAAACGGTCGTACCCTGACTAGAGAGGAC
ATGAACAGCAAGCAAATCGTCCATATCCTGTTGCGACTCCACAAGTCAAAGCAGCTGGTTAATCAATTGCTTCAGCTCAA
CTATAAAATTGAAAATCCTTATGACCTTTTAGTAGATTTTGAGCAAAATGCACCTTTGCAAATTCAACAGAATTCTTATT
TACAGGCTATCGTCAAGGAGCTAAAGCGCAGTTTACCTGAATTTCGCTCTGAGGTGGCCACGATTGTACATGGTGATATC
AAGCATAGCAACTGGGTGATTACCACCAGTGGCATGATTTTTTTGGTGGACTGGGATTGTGTACGCCTAACAGATCGAAT
GTATGATGTGGCTTATTTGCTAAGCCACTATATTCCTCGTTCGCGGTGGGCAGACTGGCTATCCTATTATGGCTATAAAA
ATAATGATAAGGTCATGCAAAAGATTATTTGGTATGCTCAATTCTCCTATCTGACTCAGATTTTAAGGTGCTTTGATAAG
AGAGATATGGAGCATGTCAATCAAGAGATTTACGCTCTTAGAAAATTTAGAGAAATGTTTAGAAAGAAATAA

Upstream 100 bases:

>100_bases
TTTACTTACCGTACAAGTTAAAGAAGATGATTGACTAAGTCCTTTAAAACAAGTAAAATAGGGATAACTGGTTACAGAAG
ATAGAAAAGGAGGGGATAAG

Downstream 100 bases:

>100_bases
TGCGAGTTAGAAAACGAAAGGGTGCGCAGGAGTACTTGGAAAACAATCCTCACTATGTCATTTTAGAGCCGGAGGCTGCT
AAGGGGCGCTGGTGTGAGGT

Product: aminoglycoside phosphotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTTTEQDLVLTPLRGKSGKAYKGTYPNGESVFIKLNTTPILPALAKEQIAPQLLWAKRMGNGDMMSAQEWLNGRTLTRED
MNSKQIVHILLRLHKSKQLVNQLLQLNYKIENPYDLLVDFEQNAPLQIQQNSYLQAIVKELKRSLPEFRSEVATIVHGDI
KHSNWVITTSGMIFLVDWDCVRLTDRMYDVAYLLSHYIPRSRWADWLSYYGYKNNDKVMQKIIWYAQFSYLTQILRCFDK
RDMEHVNQEIYALRKFREMFRKK

Sequences:

>Translated_263_residues
MTTTEQDLVLTPLRGKSGKAYKGTYPNGESVFIKLNTTPILPALAKEQIAPQLLWAKRMGNGDMMSAQEWLNGRTLTRED
MNSKQIVHILLRLHKSKQLVNQLLQLNYKIENPYDLLVDFEQNAPLQIQQNSYLQAIVKELKRSLPEFRSEVATIVHGDI
KHSNWVITTSGMIFLVDWDCVRLTDRMYDVAYLLSHYIPRSRWADWLSYYGYKNNDKVMQKIIWYAQFSYLTQILRCFDK
RDMEHVNQEIYALRKFREMFRKK
>Mature_262_residues
TTTEQDLVLTPLRGKSGKAYKGTYPNGESVFIKLNTTPILPALAKEQIAPQLLWAKRMGNGDMMSAQEWLNGRTLTREDM
NSKQIVHILLRLHKSKQLVNQLLQLNYKIENPYDLLVDFEQNAPLQIQQNSYLQAIVKELKRSLPEFRSEVATIVHGDIK
HSNWVITTSGMIFLVDWDCVRLTDRMYDVAYLLSHYIPRSRWADWLSYYGYKNNDKVMQKIIWYAQFSYLTQILRCFDKR
DMEHVNQEIYALRKFREMFRKK

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 31075; Mature: 30944

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTEQDLVLTPLRGKSGKAYKGTYPNGESVFIKLNTTPILPALAKEQIAPQLLWAKRMG
CCCCCCCEEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
NGDMMSAQEWLNGRTLTREDMNSKQIVHILLRLHKSKQLVNQLLQLNYKIENPYDLLVDF
CCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
EQNAPLQIQQNSYLQAIVKELKRSLPEFRSEVATIVHGDIKHSNWVITTSGMIFLVDWDC
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECHH
VRLTDRMYDVAYLLSHYIPRSRWADWLSYYGYKNNDKVMQKIIWYAQFSYLTQILRCFDK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDMEHVNQEIYALRKFREMFRKK
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTTEQDLVLTPLRGKSGKAYKGTYPNGESVFIKLNTTPILPALAKEQIAPQLLWAKRMG
CCCCCCEEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
NGDMMSAQEWLNGRTLTREDMNSKQIVHILLRLHKSKQLVNQLLQLNYKIENPYDLLVDF
CCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
EQNAPLQIQQNSYLQAIVKELKRSLPEFRSEVATIVHGDIKHSNWVITTSGMIFLVDWDC
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECHH
VRLTDRMYDVAYLLSHYIPRSRWADWLSYYGYKNNDKVMQKIIWYAQFSYLTQILRCFDK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDMEHVNQEIYALRKFREMFRKK
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]