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The map label for this gene is ydiB [H]

Identifier: 195977568

GI number: 195977568

Start: 454291

End: 454734

Strand: Direct

Name: ydiB [H]

Synonym: Sez_0427

Alternate gene names: 195977568

Gene position: 454291-454734 (Clockwise)

Preceding gene: 195977567

Following gene: 195977569

Centisome position: 22.44

GC content: 42.34

Gene sequence:

>444_bases
ATGTTTTATAGCAAAAATGAGAATGAATTAATCGCTTACGGGCAAGGCATTGGTAGACAGCTAAAGGCAGGAGATGTGCT
TGTCTTGACTGGTGACTTAGGTGCTGGTAAAACAACGCTGACCAAGGGGATTGCTAAGGGTTTGGGGATTGATCAGATGA
TTAAAAGTCCAACCTATACTATCGCTCGAGAATATGAGGGAAGGCTACCCTTGTATCATTTAGATGTTTATCGGATTGGT
GATGATCCAGACTCTATTGATTTAGATGATTTTATCTTTGATGGTGGGGTTACTGTGATTGAGTGGGGCGAGCTTTTAGC
CGAGGAAACCCTGCATGACTACCTTGAAATTTTAATAACAAAAACAGAAACAGGCCGGCAGGTTGATTATCTAGCACATG
GTCATCGATCAGAGGCACTTCTTGAGGAGCTTAAGCATGTCTGA

Upstream 100 bases:

>100_bases
AGCTTTGACGACACTATATGAGGAATGACGAGCCTAGAATATTTTACTGACAGGCTGGCTTAGGCTTGGAAGACCGTTTT
TTTTCTGTTATAATAGCCTT

Downstream 100 bases:

>100_bases
GCAGGTGGTGACAATCGAAGAGGCCAAGGCCTCAGATGCGTCAGCTTTGATCACTCTAATTAAAGAAGCTGCTGATGAGA
CAGATTTTATCACAGGGACT

Product: ATP/GTP hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MFYSKNENELIAYGQGIGRQLKAGDVLVLTGDLGAGKTTLTKGIAKGLGIDQMIKSPTYTIAREYEGRLPLYHLDVYRIG
DDPDSIDLDDFIFDGGVTVIEWGELLAEETLHDYLEILITKTETGRQVDYLAHGHRSEALLEELKHV

Sequences:

>Translated_147_residues
MFYSKNENELIAYGQGIGRQLKAGDVLVLTGDLGAGKTTLTKGIAKGLGIDQMIKSPTYTIAREYEGRLPLYHLDVYRIG
DDPDSIDLDDFIFDGGVTVIEWGELLAEETLHDYLEILITKTETGRQVDYLAHGHRSEALLEELKHV
>Mature_147_residues
MFYSKNENELIAYGQGIGRQLKAGDVLVLTGDLGAGKTTLTKGIAKGLGIDQMIKSPTYTIAREYEGRLPLYHLDVYRIG
DDPDSIDLDDFIFDGGVTVIEWGELLAEETLHDYLEILITKTETGRQVDYLAHGHRSEALLEELKHV

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=144, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16383; Mature: 16383

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYSKNENELIAYGQGIGRQLKAGDVLVLTGDLGAGKTTLTKGIAKGLGIDQMIKSPTYT
CCCCCCCCCEEEECCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEE
IAREYEGRLPLYHLDVYRIGDDPDSIDLDDFIFDGGVTVIEWGELLAEETLHDYLEILIT
EEECCCCCCCEEEEEEEEECCCCCCCCHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHC
KTETGRQVDYLAHGHRSEALLEELKHV
CCCCCCEEHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MFYSKNENELIAYGQGIGRQLKAGDVLVLTGDLGAGKTTLTKGIAKGLGIDQMIKSPTYT
CCCCCCCCCEEEECCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEE
IAREYEGRLPLYHLDVYRIGDDPDSIDLDDFIFDGGVTVIEWGELLAEETLHDYLEILIT
EEECCCCCCCEEEEEEEEECCCCCCCCHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHC
KTETGRQVDYLAHGHRSEALLEELKHV
CCCCCCEEHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]