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The map label for this gene is oppC [H]

Identifier: 195977426

GI number: 195977426

Start: 301470

End: 302501

Strand: Direct

Name: oppC [H]

Synonym: Sez_0281

Alternate gene names: 195977426

Gene position: 301470-302501 (Clockwise)

Preceding gene: 195977425

Following gene: 195977427

Centisome position: 14.89

GC content: 44.09

Gene sequence:

>1032_bases
ATGCTAGAAGAAACAAAATCATTTAAGCTTGTTGGAGCAGGGAGCTTAGCGACACAAGAAAAAATTGAAAAGCCGGCGCT
TTCCTTTCTTCAGGACGCTTGGCGTAGGCTAAAGCACAATAAACTAGCTGTTATAGCGATGGGGTTTTTAGCTGTGCTGC
TTTTGTTTTCTATTGGTTCTTTATTTGTTGTGTCTACAGATGATGCCAATAGCTTTAACAGTAAGGAGGTAAGCATATAC
CGTAACCTGCCGCCAAAGCTAAGCAGCAGCTTGCCATTTTGGAATGGGACCATTACCTACGCTGGTAATACAGAGCCCAA
TGACGCTTATGCGGATCAAGGGGTCCCAGAGGACAAGGCCTTCTTACTCGGGACGGATAATCTGGGGCGCAGTATTGGAA
AACGTATTACGGTAGGGATTCGTATTTCTCTTTTGATTGCTATTGTCGCAACCCTGATTGATCTAGTGATTGGGGTAACC
TATGGCTTGGTCTCAGGCTTTGTTGGTGGCAAGACTGATATGGTGATGCAGCGGATCATTGAGATTATCTCCTCTATTCC
AAACCTTGTTATTGTGACGATGCTTGGTCTTTTGCTTGGCAATGGTGTGACTTCAATTATTATTTCAATTGCGATTGTAG
GCTGGACCTCAATGGCTAGGCAGGTCCGCAACCTAACCCTGTCCTATCGAGAGCGTGATTTCGTCCTTGCTTCTCGTGCC
TTGGGAGAAAGTAATATTAAGATTGCCTTTAAGCATGTATTGCCAAATATTTCAGGGATTATCATTGTTCAAATCATGAT
GACTGTTCCGAGTGCTATCATGTATGAGTCAGTGCTATCTGCGATTAATTTAGGTGTTAAGCCACCGACAGCTTCGCTTG
GTTCATTGATTACTGATGCACAAGAAAGCCTGCAATATTATCCTTATCAGGTGCTGCTGCCGGCTTTTGCCTTGGTGCTA
ATTTCGTTGGCCTTTATTCTGTTGGGTGATGGCCTACGTGACGCTTTTGACCCAAAATCAAGTGATGAGTAG

Upstream 100 bases:

>100_bases
AACGATTGTCTATGCGCTAATGCTGATGGTTGCTATTTTGGTAACTGATATGATCATTAGTATCGCAGATCCACGTGTTC
GTTTGGGATAGGAGAGTGCT

Downstream 100 bases:

>100_bases
AGGGGAGATAAAATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGT
TAAGGCGATTCGTGATATCA

Product: oligopeptide transport system permease protein OppC

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLEETKSFKLVGAGSLATQEKIEKPALSFLQDAWRRLKHNKLAVIAMGFLAVLLLFSIGSLFVVSTDDANSFNSKEVSIY
RNLPPKLSSSLPFWNGTITYAGNTEPNDAYADQGVPEDKAFLLGTDNLGRSIGKRITVGIRISLLIAIVATLIDLVIGVT
YGLVSGFVGGKTDMVMQRIIEIISSIPNLVIVTMLGLLLGNGVTSIIISIAIVGWTSMARQVRNLTLSYRERDFVLASRA
LGESNIKIAFKHVLPNISGIIIVQIMMTVPSAIMYESVLSAINLGVKPPTASLGSLITDAQESLQYYPYQVLLPAFALVL
ISLAFILLGDGLRDAFDPKSSDE

Sequences:

>Translated_343_residues
MLEETKSFKLVGAGSLATQEKIEKPALSFLQDAWRRLKHNKLAVIAMGFLAVLLLFSIGSLFVVSTDDANSFNSKEVSIY
RNLPPKLSSSLPFWNGTITYAGNTEPNDAYADQGVPEDKAFLLGTDNLGRSIGKRITVGIRISLLIAIVATLIDLVIGVT
YGLVSGFVGGKTDMVMQRIIEIISSIPNLVIVTMLGLLLGNGVTSIIISIAIVGWTSMARQVRNLTLSYRERDFVLASRA
LGESNIKIAFKHVLPNISGIIIVQIMMTVPSAIMYESVLSAINLGVKPPTASLGSLITDAQESLQYYPYQVLLPAFALVL
ISLAFILLGDGLRDAFDPKSSDE
>Mature_343_residues
MLEETKSFKLVGAGSLATQEKIEKPALSFLQDAWRRLKHNKLAVIAMGFLAVLLLFSIGSLFVVSTDDANSFNSKEVSIY
RNLPPKLSSSLPFWNGTITYAGNTEPNDAYADQGVPEDKAFLLGTDNLGRSIGKRITVGIRISLLIAIVATLIDLVIGVT
YGLVSGFVGGKTDMVMQRIIEIISSIPNLVIVTMLGLLLGNGVTSIIISIAIVGWTSMARQVRNLTLSYRERDFVLASRA
LGESNIKIAFKHVLPNISGIIIVQIMMTVPSAIMYESVLSAINLGVKPPTASLGSLITDAQESLQYYPYQVLLPAFALVL
ISLAFILLGDGLRDAFDPKSSDE

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=321, Percent_Identity=34.8909657320872, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1787054, Length=330, Percent_Identity=29.6969696969697, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789889, Length=222, Percent_Identity=33.7837837837838, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787760, Length=229, Percent_Identity=32.3144104803493, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789964, Length=310, Percent_Identity=29.0322580645161, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1788505, Length=334, Percent_Identity=27.8443113772455, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787549, Length=316, Percent_Identity=25.6329113924051, Blast_Score=102, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37081; Mature: 37081

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEETKSFKLVGAGSLATQEKIEKPALSFLQDAWRRLKHNKLAVIAMGFLAVLLLFSIGS
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
LFVVSTDDANSFNSKEVSIYRNLPPKLSSSLPFWNGTITYAGNTEPNDAYADQGVPEDKA
EEEEECCCCCCCCCCCEEEEECCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCE
FLLGTDNLGRSIGKRITVGIRISLLIAIVATLIDLVIGVTYGLVSGFVGGKTDMVMQRII
EEEECCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EIISSIPNLVIVTMLGLLLGNGVTSIIISIAIVGWTSMARQVRNLTLSYRERDFVLASRA
HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGESNIKIAFKHVLPNISGIIIVQIMMTVPSAIMYESVLSAINLGVKPPTASLGSLITDA
CCCCCCEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QESLQYYPYQVLLPAFALVLISLAFILLGDGLRDAFDPKSSDE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure
MLEETKSFKLVGAGSLATQEKIEKPALSFLQDAWRRLKHNKLAVIAMGFLAVLLLFSIGS
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
LFVVSTDDANSFNSKEVSIYRNLPPKLSSSLPFWNGTITYAGNTEPNDAYADQGVPEDKA
EEEEECCCCCCCCCCCEEEEECCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCE
FLLGTDNLGRSIGKRITVGIRISLLIAIVATLIDLVIGVTYGLVSGFVGGKTDMVMQRII
EEEECCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EIISSIPNLVIVTMLGLLLGNGVTSIIISIAIVGWTSMARQVRNLTLSYRERDFVLASRA
HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGESNIKIAFKHVLPNISGIIIVQIMMTVPSAIMYESVLSAINLGVKPPTASLGSLITDA
CCCCCCEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QESLQYYPYQVLLPAFALVLISLAFILLGDGLRDAFDPKSSDE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]