Click here to switch to the map view.

The map label for this gene is rmuC [H]

Identifier: 195977409

GI number: 195977409

Start: 282389

End: 283642

Strand: Direct

Name: rmuC [H]

Synonym: Sez_0262

Alternate gene names: 195977409

Gene position: 282389-283642 (Clockwise)

Preceding gene: 195977408

Following gene: 195977410

Centisome position: 13.95

GC content: 43.14

Gene sequence:

>1254_bases
GTGTTAGTGCTTGTGTTGATAGGACTTGCTGCCTATTCATTTGTTAGCATAAAGCATTTGCAGAGCAGGCTAGAAAAAGC
CTTAGACAATAATGCTGATAATCTATCAGATCAGCTAACCTATCAGCTTGATATGGCAAATAAAACTCAGCTGCTAGAGC
TGTCAACAGTGATGAATCGTCAGCAAAATGAGCTTTTTCAGCAGCTGATGGATATTCGTGATACGCTGCATCAAGGCTTG
GCTGAAAATCGTGACCGCTCAGATCAGCGTTTAGAAGTAATGACGCAAAGCCTTAGTCAATCTGTCAAGGACCTACAGGA
TTCTAATGAAAAGCGGCTGGAGGAAATGCGCCACACCGTCGAAGAAAAACTAGAAAAAACACTGAAAAATCGGTTGCAGA
CCTCCTTTGAAGCCGTTTCAAAGCAGCTAGAAAGTGTTAATCAGGGTCTAGGAGAAATGCGGACCGTAGCTAAAGATGTC
GGTACCCTAAACAAGGTCTTATCCAATACCAAAACCAGAGGAATTCTAGGGGAGCTCCAGCTTGGTCAGATTGTTGAGGA
CATCATGACAGCTAACCAGTATGAAAGAGAGTTTGCCACAGTTTCTGGCTCAAGCGATCGTGTCGAATATGCTATCAAGC
TACCTGGAAATGGGCAAGGAGACTATATTTACCTACCTATTGACTCCAAGTTTCCCTTGGAGGACTATTACAGGCTGGAG
GACGCCTACGAGGCTGGTGATAGAGCTGCTATTGAGACTAGCCGAAAGGCTCTTCTTGCGGCGATTAAACGTTTTGCTAA
GAGTATTCATAGCAAATACCTGAATCCACCTGAAACAACCAATTTTGGGATTATGTTTTTACCAACCGAGGGACTCTACT
CAGAGGTGGTGCGCAATCCGGCTTTCTTTGATAGCCTTCGTCGTGAGGAAAATATTGTTGTGGCAGGCCCATCAACCTTA
TCAGCCTTGCTTAATTCCTTATCTGTTGGCTTTAAAACCCTTAACCTGCAAAAAAACGCAGACGATATTAGCAAGATTTT
AGGCAATGTTAAATTAGAATTTGAAAAATTTGGCGGTCTGCTTGCTAAGGCGCAAAAGCAGCTTAACACTGCTAACCATA
CCCTAGATCAGTTGATGTCAACTAGAACCAAAGCGATTGTTCGTGCTCTGGCTACTGTTGAAGACTACCAAGATCAGTCA
ACCCAATCCTTATTACATATACCCTTATTAGAAGAGGCAGACGATGAAGATTAA

Upstream 100 bases:

>100_bases
AACGAGTTCATTGATCAGCCTATTAAGGTTCATGTGCCAAAGGGCTATTTAATTATTATTCAGAGCAAAGATAGGAGTTA
GTATGGACCTTATTCTTTTC

Downstream 100 bases:

>100_bases
CCAAATGAAAAAAGATCAGCCCTTTGAAGGCTTTTACCTGATAAAATCAGCAGAAGTCAGAAAAACAAGAGCTGGCAAGG
ATTTTATTGCTTTTACCTTT

Product: DNA recombination protein RmuC-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLVLVLIGLAAYSFVSIKHLQSRLEKALDNNADNLSDQLTYQLDMANKTQLLELSTVMNRQQNELFQQLMDIRDTLHQGL
AENRDRSDQRLEVMTQSLSQSVKDLQDSNEKRLEEMRHTVEEKLEKTLKNRLQTSFEAVSKQLESVNQGLGEMRTVAKDV
GTLNKVLSNTKTRGILGELQLGQIVEDIMTANQYEREFATVSGSSDRVEYAIKLPGNGQGDYIYLPIDSKFPLEDYYRLE
DAYEAGDRAAIETSRKALLAAIKRFAKSIHSKYLNPPETTNFGIMFLPTEGLYSEVVRNPAFFDSLRREENIVVAGPSTL
SALLNSLSVGFKTLNLQKNADDISKILGNVKLEFEKFGGLLAKAQKQLNTANHTLDQLMSTRTKAIVRALATVEDYQDQS
TQSLLHIPLLEEADDED

Sequences:

>Translated_417_residues
MLVLVLIGLAAYSFVSIKHLQSRLEKALDNNADNLSDQLTYQLDMANKTQLLELSTVMNRQQNELFQQLMDIRDTLHQGL
AENRDRSDQRLEVMTQSLSQSVKDLQDSNEKRLEEMRHTVEEKLEKTLKNRLQTSFEAVSKQLESVNQGLGEMRTVAKDV
GTLNKVLSNTKTRGILGELQLGQIVEDIMTANQYEREFATVSGSSDRVEYAIKLPGNGQGDYIYLPIDSKFPLEDYYRLE
DAYEAGDRAAIETSRKALLAAIKRFAKSIHSKYLNPPETTNFGIMFLPTEGLYSEVVRNPAFFDSLRREENIVVAGPSTL
SALLNSLSVGFKTLNLQKNADDISKILGNVKLEFEKFGGLLAKAQKQLNTANHTLDQLMSTRTKAIVRALATVEDYQDQS
TQSLLHIPLLEEADDED
>Mature_417_residues
MLVLVLIGLAAYSFVSIKHLQSRLEKALDNNADNLSDQLTYQLDMANKTQLLELSTVMNRQQNELFQQLMDIRDTLHQGL
AENRDRSDQRLEVMTQSLSQSVKDLQDSNEKRLEEMRHTVEEKLEKTLKNRLQTSFEAVSKQLESVNQGLGEMRTVAKDV
GTLNKVLSNTKTRGILGELQLGQIVEDIMTANQYEREFATVSGSSDRVEYAIKLPGNGQGDYIYLPIDSKFPLEDYYRLE
DAYEAGDRAAIETSRKALLAAIKRFAKSIHSKYLNPPETTNFGIMFLPTEGLYSEVVRNPAFFDSLRREENIVVAGPSTL
SALLNSLSVGFKTLNLQKNADDISKILGNVKLEFEKFGGLLAKAQKQLNTANHTLDQLMSTRTKAIVRALATVEDYQDQS
TQSLLHIPLLEEADDED

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 46958; Mature: 46958

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLVLIGLAAYSFVSIKHLQSRLEKALDNNADNLSDQLTYQLDMANKTQLLELSTVMNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHCH
QQNELFQQLMDIRDTLHQGLAENRDRSDQRLEVMTQSLSQSVKDLQDSNEKRLEEMRHTV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EEKLEKTLKNRLQTSFEAVSKQLESVNQGLGEMRTVAKDVGTLNKVLSNTKTRGILGELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHH
LGQIVEDIMTANQYEREFATVSGSSDRVEYAIKLPGNGQGDYIYLPIDSKFPLEDYYRLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHH
DAYEAGDRAAIETSRKALLAAIKRFAKSIHSKYLNPPETTNFGIMFLPTEGLYSEVVRNP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCH
AFFDSLRREENIVVAGPSTLSALLNSLSVGFKTLNLQKNADDISKILGNVKLEFEKFGGL
HHHHHHHCCCCEEEECCHHHHHHHHHHHHCHHEEECCCCHHHHHHHHCCCEEHHHHHHHH
LAKAQKQLNTANHTLDQLMSTRTKAIVRALATVEDYQDQSTQSLLHIPLLEEADDED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLVLVLIGLAAYSFVSIKHLQSRLEKALDNNADNLSDQLTYQLDMANKTQLLELSTVMNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHCH
QQNELFQQLMDIRDTLHQGLAENRDRSDQRLEVMTQSLSQSVKDLQDSNEKRLEEMRHTV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EEKLEKTLKNRLQTSFEAVSKQLESVNQGLGEMRTVAKDVGTLNKVLSNTKTRGILGELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHH
LGQIVEDIMTANQYEREFATVSGSSDRVEYAIKLPGNGQGDYIYLPIDSKFPLEDYYRLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHH
DAYEAGDRAAIETSRKALLAAIKRFAKSIHSKYLNPPETTNFGIMFLPTEGLYSEVVRNP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCH
AFFDSLRREENIVVAGPSTLSALLNSLSVGFKTLNLQKNADDISKILGNVKLEFEKFGGL
HHHHHHHCCCCEEEECCHHHHHHHHHHHHCHHEEECCCCHHHHHHHHCCCEEHHHHHHHH
LAKAQKQLNTANHTLDQLMSTRTKAIVRALATVEDYQDQSTQSLLHIPLLEEADDED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]