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The map label for this gene is sgaU [H]

Identifier: 195977319

GI number: 195977319

Start: 185683

End: 186651

Strand: Direct

Name: sgaU [H]

Synonym: Sez_0172

Alternate gene names: 195977319

Gene position: 185683-186651 (Clockwise)

Preceding gene: 195977318

Following gene: 195977320

Centisome position: 9.17

GC content: 44.07

Gene sequence:

>969_bases
ATGTCTTTACCTTTATTGCAGGTCGTGGTATCACTGAAGCAGAGGATCCTGCAGCAGCGGCACGTGCCTTTAAAGACGAG
ATTCGACGCATTTGGGGGTAACAATATGGCGCGTCCTATTGGTATATATGAAAAAGCAACGCCAAAGCATTTTACTTGGC
TGGAACGCTTGCAATTTGCAAAGGCATTAGGCTTTGATTTTGTAGAAATGTCTGTCGATGAATCAGATGCTCGCCTAGCG
CGCTTGGATTGGAGTAAACAGGAGCGACTAGACATTGTCAAGGCTATTTATGAAACAGGGGTTCGTATCCCAAGCATTTG
CTTCTCTGGTCATCGTCGTTATCCACTTGGCTCTAGCAATCCAGAAACAGAAGCGACATCATTAGAGCTAATGAAAAAAT
GCATTGTGCTAGCACAGGATCTTGGTGTGCGTACCATTCAATTGGCTGGCTATGACGTTTATTATGAAGAAAAATCACCT
GAAACGCGTGCACGCTTTATCAAAAATCTCAGACAGGCCTGCACTTGGGCAGAGGAAGCACAGGTCATTTTGGCTATTGA
AATCATGGACGATCCTTTTATCAACTCAATTGAGAAATACCTGGCTGTGGAAAAAGAAATTGACTCCCCTTATCTCTTTG
TCTATCCTGATACGGGTAATGTCTCTGCATGGCATAATGACCTCTGGAGTGAATTTTACAATGGGCATCGGTCTATTGCT
GCCTTGCATCTAAAGGACACCTATGCTGTGACAGAAACATCTAAAGGGCAATTTCGTGATGTGCCATTTGGTCAGGGCTG
TGTTGATTGGGAAGAGCTGTTTGATGTGCTCAAGAAAACGCATTATCATGGCCCATTTTTGATTGAAATGTGGTCAGAAA
ATTGTGAGACTGTAGAGGAGACAAGAGCTGCCATCAAGGAGGCACAGGATTTCCTTTACCCATTGATTGAGAAAGCGGGG
TTACGCTAA

Upstream 100 bases:

>100_bases
AAAGACCTGAACAAGGTCAAAGCCCTCATTGACATGGGCTTTCGTGTGTCGGTGACGGGTGGCTTAGATATCAATACCCT
CAAGCTCTTTGAAGGGGTTG

Downstream 100 bases:

>100_bases
ATGGCAAAAGATCTACAAGAAATGCGAGAACGTGTCTGTGCAGCCAACAAGGCCCTACCGCTGCATGGGCTGGTGAAATT
TACCTGGGGCAATGTCTCAG

Product: putative L-xylulose 5-phosphate 3-epimerase

Products: NA

Alternate protein names: HUMPI [H]

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSLPLLQVVVSLKQRILQQRHVPLKTRFDAFGGNNMARPIGIYEKATPKHFTWLERLQFAKALGFDFVEMSVDESDARLA
RLDWSKQERLDIVKAIYETGVRIPSICFSGHRRYPLGSSNPETEATSLELMKKCIVLAQDLGVRTIQLAGYDVYYEEKSP
ETRARFIKNLRQACTWAEEAQVILAIEIMDDPFINSIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDLWSEFYNGHRSIA
ALHLKDTYAVTETSKGQFRDVPFGQGCVDWEELFDVLKKTHYHGPFLIEMWSENCETVEETRAAIKEAQDFLYPLIEKAG
LR

Sequences:

>Translated_322_residues
MSLPLLQVVVSLKQRILQQRHVPLKTRFDAFGGNNMARPIGIYEKATPKHFTWLERLQFAKALGFDFVEMSVDESDARLA
RLDWSKQERLDIVKAIYETGVRIPSICFSGHRRYPLGSSNPETEATSLELMKKCIVLAQDLGVRTIQLAGYDVYYEEKSP
ETRARFIKNLRQACTWAEEAQVILAIEIMDDPFINSIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDLWSEFYNGHRSIA
ALHLKDTYAVTETSKGQFRDVPFGQGCVDWEELFDVLKKTHYHGPFLIEMWSENCETVEETRAAIKEAQDFLYPLIEKAG
LR
>Mature_321_residues
SLPLLQVVVSLKQRILQQRHVPLKTRFDAFGGNNMARPIGIYEKATPKHFTWLERLQFAKALGFDFVEMSVDESDARLAR
LDWSKQERLDIVKAIYETGVRIPSICFSGHRRYPLGSSNPETEATSLELMKKCIVLAQDLGVRTIQLAGYDVYYEEKSPE
TRARFIKNLRQACTWAEEAQVILAIEIMDDPFINSIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDLWSEFYNGHRSIAA
LHLKDTYAVTETSKGQFRDVPFGQGCVDWEELFDVLKKTHYHGPFLIEMWSENCETVEETRAAIKEAQDFLYPLIEKAGL
R

Specific function: Isomerization of D-arabino-6-hexulose 3-phosphate to D- fructose 6-phosphate [H]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HUMPI family [H]

Homologues:

Organism=Escherichia coli, GI1790641, Length=283, Percent_Identity=52.6501766784452, Blast_Score=307, Evalue=6e-85,
Organism=Escherichia coli, GI87082294, Length=282, Percent_Identity=52.4822695035461, Blast_Score=294, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004560
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: 5.-.-.-

Molecular weight: Translated: 37098; Mature: 36966

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPLLQVVVSLKQRILQQRHVPLKTRFDAFGGNNMARPIGIYEKATPKHFTWLERLQFA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KALGFDFVEMSVDESDARLARLDWSKQERLDIVKAIYETGVRIPSICFSGHRRYPLGSSN
HHHCCHHEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC
PETEATSLELMKKCIVLAQDLGVRTIQLAGYDVYYEEKSPETRARFIKNLRQACTWAEEA
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEECCCCCHHHHHHHHHHHHHCCHHHCC
QVILAIEIMDDPFINSIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDLWSEFYNGHRSIA
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEE
ALHLKDTYAVTETSKGQFRDVPFGQGCVDWEELFDVLKKTHYHGPFLIEMWSENCETVEE
EEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHCCHHHHHH
TRAAIKEAQDFLYPLIEKAGLR
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLPLLQVVVSLKQRILQQRHVPLKTRFDAFGGNNMARPIGIYEKATPKHFTWLERLQFA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KALGFDFVEMSVDESDARLARLDWSKQERLDIVKAIYETGVRIPSICFSGHRRYPLGSSN
HHHCCHHEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC
PETEATSLELMKKCIVLAQDLGVRTIQLAGYDVYYEEKSPETRARFIKNLRQACTWAEEA
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEECCCCCHHHHHHHHHHHHHCCHHHCC
QVILAIEIMDDPFINSIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDLWSEFYNGHRSIA
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEE
ALHLKDTYAVTETSKGQFRDVPFGQGCVDWEELFDVLKKTHYHGPFLIEMWSENCETVEE
EEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHCCHHHHHH
TRAAIKEAQDFLYPLIEKAGLR
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]