Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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Identifier: 195953709

GI number:

Start: 1245364

End: 1247037

Strand: Direct

Name: Not Available

Synonym: HY04AAS1_1336

Alternate gene names: NA

Gene position: NA

Preceding gene: 195953708

Following gene: 195953710

Centisome position: NA

GC content: NA

Gene sequence:

>1674_bases
ATGATAAGTGCTTTAGGTAGGCATGTTGTTGTTAAAAGTCAAATACAGAGTTTAGATGATTCGGCGGATTTATATAGCTT
AGTTTTTAATACGCTTCTTGGCCTTAGAAATATAAATATTGAAGATTTGGATGTAAAGTTGAAAAATATACCAAGTTTTG
AGCTTTTACCAAACATAAACCAAGCCGTAGATAGACTTGTAAAAGCCATAAAATCTAAAGAAAGGATACTGCTTTACGGA
GATTACGATGTGGACGGGGTTACTTCTACTACCATCATGTACGATTTTTTAAAGCAAATAGGTGCCAACGTAGTACCGGT
GCTTCCAAACAGAAACTCCGGCTACGGGCTTTCAAAGGAGATTATAGATTTATTCTCAAAGTATTCTAACTTAGTGCTTA
CATTAGACAACGGTACCACAGCCGTTCATGAGACAAAATATGCAAAAGAAAAATACAATATGGATTTTATCATTTTAGAC
CATCATATGATAAATCATGGAGAACATTTGCCTGAGGCTATATTGGTAAATCCAAACTTAGAAAAAGACAACAAACTAAA
AGGCCTATGCACAGCTGGGCTTTCCTTTTATATGGTGGGGGCTTTAAGAAGGGCTTTGGGTGTAGATTTTGATATAAAAA
AATATCTTGATTTGGTGGCAGTAGGTACTGTAGCAGATGTGATGCCGATAAATTCATTAAACAGAGTCCTCATATCTAAA
GGTCTTGAGCTTATAAACAAGATAAAAGATATGCCTTGGGATATGGCTACAGATTTTGGAAAAGCTGGTATGAAAGCCCT
TATAAACTACATATCAAAAACCCAAAACGGAAATCAAAAGATAATCACCGCCAAAGATATAGGATTTTCAATAGCCCCAA
GAATAAACGCCGCAGGTCGCATAAGAAAACCTCAAATAGCTTTGAAGCTTTTGGCGGAAAAAAACTATGAGAAAGCTAGA
ATCTTAGCTGAAGACTTAAACAAGATAAACCAAGATAGAAGAAGAATATCAAACGAGATGTTTAAAGAGGCTTATAGCCT
TGCCTCTCAGTCCAACGATGATTTTGTGATACTTGGAAAACAAACGTGGCATCATGGGGTTCTTGGAATTGTGGCTGGAA
GACTTTCTAACAAGCTTAAAAAACCAACAGGTATATTTCACATCAACAACACTCACGCGGTTGGCTCTATAAGATCTGTG
GAAGGTCTTGATGTTCATAAGCTTTTATCAAATTTAAGCTATATGTTTGATAAATGGGGAGGTCATGCTGGAGCAGCTGG
GGTTACCATTAAAAAAGAATATTTTGATGCTTTTAGACAAAAGATAAACGATTTATTAAAGAGAGAATCCTTTGAAGTGG
ATAGGGTTTTAGAGGTGGATATGGAACTTCCCCTAAGAAGCGTTGATAAACGTATTGGAGAAATAATAGAGAAGCTATCT
CCATATGGTGAACTAAACCCAGAACCGATTTTTATATCTCAAGATATCACCGTATCTTCTATATCAAGCAAAGGCGTAGG
CGTAAGGGTGAAAACCTTAGACAAAGATAAAGAGGTAGAGCTAAGCTGTTTTGAAGAGGAGCTTTTTGTAAAACTAAGAC
CTGGTCAACGTTTAAAAGCCATATACAACATAGATTCTTATGGAATAAACATGATAGATGTGGTATTTTGTTGA

Upstream 100 bases:

>100_bases
TTAGCTTAGGAGCTATTAAAGAGACTTATGGGCTTGCTATAAAATCAAACATGGAAGACCTTGATTTTTCAGCTATATAT
AATCTCTATAAGAAGAGTTT

Downstream 100 bases:

>100_bases
TATCTGATGGCTTCTGGTAATACCCACGATTTTTTAAACTTAGCGACGCTTCCTATCTTCCTTTACGGTGTGCCTCACGA
GTATTTTTTATATTTTGGAA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>557_residues
MISALGRHVVVKSQIQSLDDSADLYSLVFNTLLGLRNINIEDLDVKLKNIPSFELLPNINQAVDRLVKAIKSKERILLYG
DYDVDGVTSTTIMYDFLKQIGANVVPVLPNRNSGYGLSKEIIDLFSKYSNLVLTLDNGTTAVHETKYAKEKYNMDFIILD
HHMINHGEHLPEAILVNPNLEKDNKLKGLCTAGLSFYMVGALRRALGVDFDIKKYLDLVAVGTVADVMPINSLNRVLISK
GLELINKIKDMPWDMATDFGKAGMKALINYISKTQNGNQKIITAKDIGFSIAPRINAAGRIRKPQIALKLLAEKNYEKAR
ILAEDLNKINQDRRRISNEMFKEAYSLASQSNDDFVILGKQTWHHGVLGIVAGRLSNKLKKPTGIFHINNTHAVGSIRSV
EGLDVHKLLSNLSYMFDKWGGHAGAAGVTIKKEYFDAFRQKINDLLKRESFEVDRVLEVDMELPLRSVDKRIGEIIEKLS
PYGELNPEPIFISQDITVSSISSKGVGVRVKTLDKDKEVELSCFEEELFVKLRPGQRLKAIYNIDSYGINMIDVVFC

Sequences:
NA

Specific function: NA

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA