| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952975
Identifier: 195952975
GI number: 195952975
Start: 535698
End: 536558
Strand: Direct
Name: 195952975
Synonym: HY04AAS1_0600
Alternate gene names: NA
Gene position: 535698-536558 (Clockwise)
Preceding gene: 195952974
Following gene: 195952983
Centisome position: 34.35
GC content: 38.91
Gene sequence:
>861_bases ATGGAAGAGGTTTTGGACGTAGCTACAAATGCTTTGACAGACTCAATGGTGGAAAGGCTTGCAAACAGTGTATCCACCAT AGCAGAGTTATCTGATGCAATAGCCTCTTCTAAACTCCTTAATACAATAGATAAGCTATCCAAAAACGCTGAAACCTTAG AATCTTCTTTGGATGCCGTATTTGGGCTTTTGTCGGCTATAAATGCAATGAACAACGCTTTTACCGATTCTATGTTAGAA AGGCTTACAGTTAGCTTGTCAAAAATCGTGGAGCTTACCGATTATATATCAAACTCTCAGCTTATGGAGGTTATAGAAAA AATAGCTAAAAACGCAGATGCCCTAAATAAATCTATAGACGCCATAATAAGCTTTTCCAACACTTTGGCGGTGATTGATA ACGCTTTTACCGATTCTATGTTAGAAAGGCTTGTTTCTTTTATGGCAGAACTGGGTGAGCTCACAGACGAGGTTAGAAGT GCCGAGCTAAAAACTATGATTCCTATGCTTACTACTTTGGCTAAAGATGGTGGTATGGAAGCTCTTGTAGATACTGCAAA AGCACTCGTTGCCGTAAGAAATGCCCTTTCTGACTCCATGCTAGAAAGGGTGGCATCTGTTGTAGTTGACACTATAGACT ATTTTGCCTCTTTAAGAGCCCAAAGTATAGGAAGCTATCTACTGGAATCTGTAAACAAAACCACTAAGGAGTTTTCCGAA AAAGAACAAAAACCAAGTTTATTTGGTTTATTGAAAGAGCTTAAAGATCCTCAGACACTTCAAAGCATTATGTTTGTGTT AGCTCTTATAAAAAATATGCCGCAAGGGCTTGCCAAAGCAACAGGTTGTCAGACATGCTAA
Upstream 100 bases:
>100_bases CAAGTCCTATGCCACCATCCAAAATGATACACTGGTTGAAGTTAGGATATAACCGTATGTATTGGTTAACTGCAAGAGGT GTCTTGTAAGGAGGGATTTT
Downstream 100 bases:
>100_bases ATTGAAAGCCGTCCCATACATGGGACGGTGAAAATGATTTTAAGAGTTATTTCAAGAGTTTAAGGCTTCGTAGACTTTAC CCACCAAAGCTTCCGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAVFGLLSAINAMNNAFTDSMLE RLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSIDAIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRS AELKTMIPMLTTLAKDGGMEALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC
Sequences:
>Translated_286_residues MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAVFGLLSAINAMNNAFTDSMLE RLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSIDAIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRS AELKTMIPMLTTLAKDGGMEALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC >Mature_286_residues MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAVFGLLSAINAMNNAFTDSMLE RLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSIDAIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRS AELKTMIPMLTTLAKDGGMEALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30969; Mature: 30969
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLLSAINAMNNAFTDSMLERLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRSAELKTMIPMLTTLAKDGGME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLLSAINAMNNAFTDSMLERLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRSAELKTMIPMLTTLAKDGGME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA