Click here to switch to the map view.

The map label for this gene is 195952973

Identifier: 195952973

GI number: 195952973

Start: 534292

End: 534519

Strand: Direct

Name: 195952973

Synonym: HY04AAS1_0598

Alternate gene names: NA

Gene position: 534292-534519 (Clockwise)

Preceding gene: 195952972

Following gene: 195952974

Centisome position: 34.26

GC content: 40.79

Gene sequence:

>228_bases
ATGGCTGATAAGGTAATTGACGCAAGAGGAAGCTTTTGCCCGGGGCCTTTGATGGAGCTTATAGCTGCTATAAAGTCAAA
TCCCGTAGGCACTACCATAGAAGTATTATCTACCGACAAGGGATCGGCAAAAGATATACCAGATTGGGTAAAAAAAGTAG
GTCATGAAATGGTAGGAGTAGAAGAAAAAGATGGATATTGGTCCATCGTTGTAAAAAGAACCAAGTAA

Upstream 100 bases:

>100_bases
GAAGATTTGGAAGAGGGTTTGTTTGACGATATCATAGGCCTTACATCTTTTCTTGATATGGCTGAAGATGCAAAAATTCT
ATTTATATGAGGAGGTTTGA

Downstream 100 bases:

>100_bases
GCTAAAAAGGAGGTAAAGCATATGGCAAAGCACGTTGTAATAGTAGGTGGTGGAGTAGCTGGCACAATAATAGCTAACCT
TTTGGCAAGAGGCTTAAAAG

Product: SirA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MADKVIDARGSFCPGPLMELIAAIKSNPVGTTIEVLSTDKGSAKDIPDWVKKVGHEMVGVEEKDGYWSIVVKRTK

Sequences:

>Translated_75_residues
MADKVIDARGSFCPGPLMELIAAIKSNPVGTTIEVLSTDKGSAKDIPDWVKKVGHEMVGVEEKDGYWSIVVKRTK
>Mature_74_residues
ADKVIDARGSFCPGPLMELIAAIKSNPVGTTIEVLSTDKGSAKDIPDWVKKVGHEMVGVEEKDGYWSIVVKRTK

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001455 [H]

Pfam domain/function: PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 8145; Mature: 8013

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00059 ADH_ZINC ; PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKVIDARGSFCPGPLMELIAAIKSNPVGTTIEVLSTDKGSAKDIPDWVKKVGHEMVGV
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
EEKDGYWSIVVKRTK
CCCCCEEEEEEEECC
>Mature Secondary Structure 
ADKVIDARGSFCPGPLMELIAAIKSNPVGTTIEVLSTDKGSAKDIPDWVKKVGHEMVGV
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
EEKDGYWSIVVKRTK
CCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]