| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is asd [H]
Identifier: 195952788
GI number: 195952788
Start: 355375
End: 356382
Strand: Direct
Name: asd [H]
Synonym: HY04AAS1_0410
Alternate gene names: 195952788
Gene position: 355375-356382 (Clockwise)
Preceding gene: 195952779
Following gene: 195952789
Centisome position: 22.79
GC content: 38.89
Gene sequence:
>1008_bases ATGGTAAATGTTGCTATTGTTGGTGCTACTGGCGAAGTAGGAAGAACGTTTTTAAAGGTTTTGGAAGAAAGGAACTTTCC CGTCAAAGAACTTAGGCTTTTTGCATCTTCAAAGTCAGAAGGCAGAACAATGACTTTTAAGGGCCACGAGTATAAGATGG AGGCTCTCGAAAAACAAACGTCTTTTAAAGGTATAGATATAGCGCTTTTTTCTGCTGGTTCCTCGGTTAGCAAAGAATGG GCTCCTAAGTTTGCTCAAGATGGTGTTGTGGTGATAGATAATTCTTCAGCTTGGAGAATGGACGATGATGTGCCATTGGT AGTGCCAGAGGTAAATAAAGAAGATATAAAAAAACATAAAGGTATAATAGCAAATCCAAACTGCTCTACCATTCAAATGC TTGTGGCTATAAAACCCATATACGATGAGTTTGGTATATCAAAGATTATAGTATCTACTTATCAAGCGGTATCAGGAGCT GGGGCTAAAGCTATAGAAGAGCTAAAAATCCAGGCAGAAAATTGGTGCCAGAAAAAAAGGATAGAACCAAATCATGTTTT GCCAAAGCGAATAGCTTTTAACGTGATACCTCAGATAGATGTATTTTTAGAGGACGGATACACCAAAGAAGAAACAAAGA TGTTAAACGAAACAAGAAAGATGCTTCACGACAACGATATAAGAGTATCTGCCACCACCGTGAGAGTACCTGTGTTTTAT GGACACTCAGAAGCCATAAGCTTAGAACTAAAAAAAGAACTTGATATTCAAAGAGTAAGAGAGCTTTTAAGAAAAGCCCC AGGTGTAATCCTCATGGATGAGCCGAAGGATGGTGTGTATCCAATACCAATAGTGGTAGAAGGAAGAGATGAGGTATTTG TAGGAAGGATAAGAAAAGATAGGGCTTTTGACAACGGTTTATCTATGTGGGTAGTGGCAGACAACATAAGAAAAGGTGCT GCCACAAATGCAATCCAAATAGCGGAGGTGCTTTATGAAAGTAGATGA
Upstream 100 bases:
>100_bases ACCTTTCCATAGATATTTCAATACGTCTTTTGTTTCCATATAGTATATTATACAGAAATTTTGTTGCAGAACGGCTCTTA ATTTATTATAATACTTATCT
Downstream 100 bases:
>100_bases ATATTTAAAGGCTGGTCTTAAAAATGAAGTTTCAGAAAGTTTAGAAGGTTTGATGTCTGGGCTTTGTAAAGAGGGTTGTC ATCGTCTTGAGCTTTTCATA
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MVNVAIVGATGEVGRTFLKVLEERNFPVKELRLFASSKSEGRTMTFKGHEYKMEALEKQTSFKGIDIALFSAGSSVSKEW APKFAQDGVVVIDNSSAWRMDDDVPLVVPEVNKEDIKKHKGIIANPNCSTIQMLVAIKPIYDEFGISKIIVSTYQAVSGA GAKAIEELKIQAENWCQKKRIEPNHVLPKRIAFNVIPQIDVFLEDGYTKEETKMLNETRKMLHDNDIRVSATTVRVPVFY GHSEAISLELKKELDIQRVRELLRKAPGVILMDEPKDGVYPIPIVVEGRDEVFVGRIRKDRAFDNGLSMWVVADNIRKGA ATNAIQIAEVLYESR
Sequences:
>Translated_335_residues MVNVAIVGATGEVGRTFLKVLEERNFPVKELRLFASSKSEGRTMTFKGHEYKMEALEKQTSFKGIDIALFSAGSSVSKEW APKFAQDGVVVIDNSSAWRMDDDVPLVVPEVNKEDIKKHKGIIANPNCSTIQMLVAIKPIYDEFGISKIIVSTYQAVSGA GAKAIEELKIQAENWCQKKRIEPNHVLPKRIAFNVIPQIDVFLEDGYTKEETKMLNETRKMLHDNDIRVSATTVRVPVFY GHSEAISLELKKELDIQRVRELLRKAPGVILMDEPKDGVYPIPIVVEGRDEVFVGRIRKDRAFDNGLSMWVVADNIRKGA ATNAIQIAEVLYESR >Mature_335_residues MVNVAIVGATGEVGRTFLKVLEERNFPVKELRLFASSKSEGRTMTFKGHEYKMEALEKQTSFKGIDIALFSAGSSVSKEW APKFAQDGVVVIDNSSAWRMDDDVPLVVPEVNKEDIKKHKGIIANPNCSTIQMLVAIKPIYDEFGISKIIVSTYQAVSGA GAKAIEELKIQAENWCQKKRIEPNHVLPKRIAFNVIPQIDVFLEDGYTKEETKMLNETRKMLHDNDIRVSATTVRVPVFY GHSEAISLELKKELDIQRVRELLRKAPGVILMDEPKDGVYPIPIVVEGRDEVFVGRIRKDRAFDNGLSMWVVADNIRKGA ATNAIQIAEVLYESR
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=334, Percent_Identity=32.0359281437126, Blast_Score=191, Evalue=4e-50, Organism=Escherichia coli, GI1789841, Length=363, Percent_Identity=27.8236914600551, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320362, Length=384, Percent_Identity=29.9479166666667, Blast_Score=106, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37604; Mature: 37604
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNVAIVGATGEVGRTFLKVLEERNFPVKELRLFASSKSEGRTMTFKGHEYKMEALEKQT CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH SFKGIDIALFSAGSSVSKEWAPKFAQDGVVVIDNSSAWRMDDDVPLVVPEVNKEDIKKHK CCCCEEEEEEECCCCCCHHHCCHHHCCCEEEEECCCCEECCCCCCEEECCCCHHHHHHHC GIIANPNCSTIQMLVAIKPIYDEFGISKIIVSTYQAVSGAGAKAIEELKIQAENWCQKKR CEEECCCCCCEEEEEEEEHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC IEPNHVLPKRIAFNVIPQIDVFLEDGYTKEETKMLNETRKMLHDNDIRVSATTVRVPVFY CCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE GHSEAISLELKKELDIQRVRELLRKAPGVILMDEPKDGVYPIPIVVEGRDEVFVGRIRKD CCCCEEEEEEHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCEEEEEHHHC RAFDNGLSMWVVADNIRKGAATNAIQIAEVLYESR CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MVNVAIVGATGEVGRTFLKVLEERNFPVKELRLFASSKSEGRTMTFKGHEYKMEALEKQT CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH SFKGIDIALFSAGSSVSKEWAPKFAQDGVVVIDNSSAWRMDDDVPLVVPEVNKEDIKKHK CCCCEEEEEEECCCCCCHHHCCHHHCCCEEEEECCCCEECCCCCCEEECCCCHHHHHHHC GIIANPNCSTIQMLVAIKPIYDEFGISKIIVSTYQAVSGAGAKAIEELKIQAENWCQKKR CEEECCCCCCEEEEEEEEHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC IEPNHVLPKRIAFNVIPQIDVFLEDGYTKEETKMLNETRKMLHDNDIRVSATTVRVPVFY CCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE GHSEAISLELKKELDIQRVRELLRKAPGVILMDEPKDGVYPIPIVVEGRDEVFVGRIRKD CCCCEEEEEEHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCEEEEEHHHC RAFDNGLSMWVVADNIRKGAATNAIQIAEVLYESR CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]