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The map label for this gene is 195952779

Identifier: 195952779

GI number: 195952779

Start: 350385

End: 351209

Strand: Direct

Name: 195952779

Synonym: HY04AAS1_0401

Alternate gene names: NA

Gene position: 350385-351209 (Clockwise)

Preceding gene: 195952778

Following gene: 195952788

Centisome position: 22.47

GC content: 34.55

Gene sequence:

>825_bases
ATGACACCACGTCTTAAAAGTCGCCAAAAAGAGTATTTTATTTTAGGTATTTTGATTTCTTTACTACTTCATATTTGGCT
TTTAATAGCTTTTATCCATATGAAAACCAAAAAACCAAAGAAAAATAAGCCAATAGAGATAACACTAGTACAAAAAGGTG
TACCAAACAAAGCTATAGTCCCGCCTGCTATACCAATGCCGCCATTCCCCACACGTAAACCCTCAAAGCCTCATCGCGTT
TCAAAACCATCAATAAAACCATCAACTCGTAACCATGTTAATAGACCCTCTACTCAAAAGTACGAAGCGCTTCCTTCTCG
TATTTTAAACTCTTTGCCAAAAAGTAGCTACAAACCCTATATTGAATCTGAATCAAAGTCAACAGCTTCTTCACCAGTAC
CATCTTCCAAACCAAACACAAAGACATCTTTACCTTCTACTCCCATAGCAAAAGAAGGACAAAAACACTACAATGCAAAG
GCGAATCTAAATTTAAACATAAAACAATTTGTAAAGAAAGAAGAAAGCGTTTATCAATATCTTAGCTGGCTTATTAGGTA
TCTTAATAAACAGGCTAGAGAAAGAGATTTGTATCCTAAAGAAGCTAAAAAACTTGGTATAAAGGGTGAGGTGGTGGTAC
GGGTTACTATAAACAAAAATGGGACAATAGATATGTCTTCTTTAAGAGTTGTGCAATCAAGCGGTTACAAGATTTTGGAC
GAAAGTGCACCAAAAATTATATACGAACTTTCTCCTTTTAGAAAACCGCCAAAGAAGATAACAATTAATTTACCTGTGTA
TTTCTTAATAAACGGCTATTATTAA

Upstream 100 bases:

>100_bases
TACAGGCTTCTAAGGATACACCTTTTCAAAATGTAGTAAGTGTAATAGATGCTTGCAGAGAGCTTGGTATAAATAAGTAT
ATGATAGAAACAAAGAAAGA

Downstream 100 bases:

>100_bases
TGGTTTATGTTGATCTTAGGATATAAAATCTCTACCTTTTTAACCCATCTAAGATTACCTTTGATAGATGTATCTATAAC
ATTTTTTACCGACATGTCAA

Product: TonB family protein

Products: NA

Alternate protein names: NB Family C- Domain Protein

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTPRLKSRQKEYFILGILISLLLHIWLLIAFIHMKTKKPKKNKPIEITLVQKGVPNKAIVPPAIPMPPFPTRKPSKPHRV
SKPSIKPSTRNHVNRPSTQKYEALPSRILNSLPKSSYKPYIESESKSTASSPVPSSKPNTKTSLPSTPIAKEGQKHYNAK
ANLNLNIKQFVKKEESVYQYLSWLIRYLNKQARERDLYPKEAKKLGIKGEVVVRVTINKNGTIDMSSLRVVQSSGYKILD
ESAPKIIYELSPFRKPPKKITINLPVYFLINGYY

Sequences:

>Translated_274_residues
MTPRLKSRQKEYFILGILISLLLHIWLLIAFIHMKTKKPKKNKPIEITLVQKGVPNKAIVPPAIPMPPFPTRKPSKPHRV
SKPSIKPSTRNHVNRPSTQKYEALPSRILNSLPKSSYKPYIESESKSTASSPVPSSKPNTKTSLPSTPIAKEGQKHYNAK
ANLNLNIKQFVKKEESVYQYLSWLIRYLNKQARERDLYPKEAKKLGIKGEVVVRVTINKNGTIDMSSLRVVQSSGYKILD
ESAPKIIYELSPFRKPPKKITINLPVYFLINGYY
>Mature_273_residues
TPRLKSRQKEYFILGILISLLLHIWLLIAFIHMKTKKPKKNKPIEITLVQKGVPNKAIVPPAIPMPPFPTRKPSKPHRVS
KPSIKPSTRNHVNRPSTQKYEALPSRILNSLPKSSYKPYIESESKSTASSPVPSSKPNTKTSLPSTPIAKEGQKHYNAKA
NLNLNIKQFVKKEESVYQYLSWLIRYLNKQARERDLYPKEAKKLGIKGEVVVRVTINKNGTIDMSSLRVVQSSGYKILDE
SAPKIIYELSPFRKPPKKITINLPVYFLINGYY

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31254; Mature: 31123

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRLKSRQKEYFILGILISLLLHIWLLIAFIHMKTKKPKKNKPIEITLVQKGVPNKAIV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
PPAIPMPPFPTRKPSKPHRVSKPSIKPSTRNHVNRPSTQKYEALPSRILNSLPKSSYKPY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
IESESKSTASSPVPSSKPNTKTSLPSTPIAKEGQKHYNAKANLNLNIKQFVKKEESVYQY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
LSWLIRYLNKQARERDLYPKEAKKLGIKGEVVVRVTINKNGTIDMSSLRVVQSSGYKILD
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHCCCCEEEC
ESAPKIIYELSPFRKPPKKITINLPVYFLINGYY
CCCCEEEEECCCCCCCCCEEEEECEEEEEEECCC
>Mature Secondary Structure 
TPRLKSRQKEYFILGILISLLLHIWLLIAFIHMKTKKPKKNKPIEITLVQKGVPNKAIV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
PPAIPMPPFPTRKPSKPHRVSKPSIKPSTRNHVNRPSTQKYEALPSRILNSLPKSSYKPY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
IESESKSTASSPVPSSKPNTKTSLPSTPIAKEGQKHYNAKANLNLNIKQFVKKEESVYQY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
LSWLIRYLNKQARERDLYPKEAKKLGIKGEVVVRVTINKNGTIDMSSLRVVQSSGYKILD
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHCCCCEEEC
ESAPKIIYELSPFRKPPKKITINLPVYFLINGYY
CCCCEEEEECCCCCCCCCEEEEECEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA