| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952730
Identifier: 195952730
GI number: 195952730
Start: 310247
End: 311593
Strand: Direct
Name: 195952730
Synonym: HY04AAS1_0352
Alternate gene names: NA
Gene position: 310247-311593 (Clockwise)
Preceding gene: 195952729
Following gene: 195952738
Centisome position: 19.89
GC content: 40.01
Gene sequence:
>1347_bases ATGAGAAAGAAGCTGTTGTTAGCACTCTCGGTTTTTGGTATGGCTATGTTGCCATTTTATAGTGCTGATGCCATCTTGCT AAAAGCAAATGACAACGAGTTTGCAAACGTAGGTCTGAAGCTTGCTATTTGGGCTCAAAACAACGGTGCCATTACTACCA ACGACCACAACAGTACAAACTTCAGCATAGAAAACGCAAGAATCTACTTTGCAGGCCAGATAAACCCTATAGTTCAATTT GGCGCAAACCTTGATTTTGCAGATAATAACGCTTTAGCTCCAGATGGTTCTGCAAGAGCTCATACTGGTGGTATAGGTCC AAAAACGGGGGCTTTTTCTGGTATAAGAGACGCTTTTATAAACTTTAAATTTATGCCGCAAGCCCAGCTTATGGCGGGCT TGTTTGTAGACCCATGGTCAAGGGTATCGCTTGGCGATTTGTATTCTTTCATAGTACCCCTTGAAAACTACAACCCCGGC ATAGGCGAGATAGACGTTGATGGTTCAAAGTTATTGGGAAAATCCGTAGGCTTCATGAATCCAACAATCCCATTTACGCT TGGTTCTGATGTGGGTAACGCTTACCGGGATGCCGGTATAACCTTGTGGGGTGATATAGGTAAGGATGCCATGATAAAGT ACTATCTCATGGCTGGTAATGGTAAATACGATTATGAAGCAGGTCAAAACGGTAATAGCAATCTAAAATATGGTTTTAGG ATAGAATTTACACCTACAATGCTTGGATACAAAGGTACGCCAAGTTTTGTAGATGAAGATACGTTCCTTGGCAAACAAAA CACATTGACATTTGCTTTTGCCTATCAACAACAAAAGATAGATTGCTCAGGTATATCGTCAAGCAGTATATGTAATAACC AGACCTCTTCCACCACAGCAAAAGCATATACATTTGACGTATTGTGGGAACAAAAGTTTGGGGATTTTGTGCCAAACTTC CAAGCTGCATGGCTTGACCAAAAGGATTTAGGGTATGCACAAGCTGGAACATCAGGACCAGTAGCTCAACCAGAAGCCGA AGGGTATTACCTACAAACACAGCTTTTATACGATCAAGTTGTAGGTTTAGGAAAACCAGCACTCGTGCTAAGATATGAAG AAGATGAAAACAAAAATTACTATACCTACAATGGCAATTTTGTAACTGGTAAAGTATCTATGACAGATATATTCTTTAAC TACTATATAGATGGTGAAAATGCAAACATATCTTTAGGTGCTCAAATAGTATCTCCAAACTCTGATTTGAAAAACGCCAC CGCAAATAATGGCAATCAACTCAAATCCTTCACAGACTGGACACTTGCTTTAAGAACCGTATTTTAA
Upstream 100 bases:
>100_bases GCCATCTGGCCTCCTTTTTTATTTTTCTTGATCTATATCAATGATTATTAATACCAAATTGTATCAAAATATTGTCATCA ACTTAATGAAGGAGGTTTTT
Downstream 100 bases:
>100_bases TTTATTTTTCCCGCCTTTGGCGGGATGTTGTCTTTATACATTTTTGCATAGCTTTGTCTTAGACTGGGCGGATTCAAAGC CCAGTCTTTTTTAACTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTNFSIENARIYFAGQINPIVQF GANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFINFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPG IGEIDVDGSKLLGKSVGFMNPTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTAKAYTFDVLWEQKFGDFVPNF QAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQVVGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFN YYIDGENANISLGAQIVSPNSDLKNATANNGNQLKSFTDWTLALRTVF
Sequences:
>Translated_448_residues MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTNFSIENARIYFAGQINPIVQF GANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFINFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPG IGEIDVDGSKLLGKSVGFMNPTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTAKAYTFDVLWEQKFGDFVPNF QAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQVVGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFN YYIDGENANISLGAQIVSPNSDLKNATANNGNQLKSFTDWTLALRTVF >Mature_448_residues MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTNFSIENARIYFAGQINPIVQF GANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFINFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPG IGEIDVDGSKLLGKSVGFMNPTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTAKAYTFDVLWEQKFGDFVPNF QAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQVVGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFN YYIDGENANISLGAQIVSPNSDLKNATANNGNQLKSFTDWTLALRTVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49074; Mature: 49074
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTN CCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEECCEEEEEEECCCCEEEECCCCCCE FSIENARIYFAGQINPIVQFGANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFI EEEECEEEEEEECCCEEHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHE NFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPGIGEIDVDGSKLLGKSVGFMN EEEECCHHHHHHCEEECCCCCCCHHHHEEEEEEECCCCCCCCEEECCCHHHHHCCCCCCC PTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR CCCCEEECCCCCCHHHHCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTA EEECHHEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE KAYTFDVLWEQKFGDFVPNFQAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQV EEEEEEEEEEHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHH VGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFNYYIDGENANISLGAQIVSPN HCCCCCEEEEEEECCCCCCEEEECCEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCC SDLKNATANNGNQLKSFTDWTLALRTVF CCCCCCCCCCCCCCCCHHCEEEEEEECC >Mature Secondary Structure MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTN CCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEECCEEEEEEECCCCEEEECCCCCCE FSIENARIYFAGQINPIVQFGANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFI EEEECEEEEEEECCCEEHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHE NFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPGIGEIDVDGSKLLGKSVGFMN EEEECCHHHHHHCEEECCCCCCCHHHHEEEEEEECCCCCCCCEEECCCHHHHHCCCCCCC PTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR CCCCEEECCCCCCHHHHCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTA EEECHHEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE KAYTFDVLWEQKFGDFVPNFQAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQV EEEEEEEEEEHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHH VGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFNYYIDGENANISLGAQIVSPN HCCCCCEEEEEEECCCCCCEEEECCEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCC SDLKNATANNGNQLKSFTDWTLALRTVF CCCCCCCCCCCCCCCCHHCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA