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The map label for this gene is recR [H]

Identifier: 195952624

GI number: 195952624

Start: 217272

End: 217943

Strand: Direct

Name: recR [H]

Synonym: HY04AAS1_0244

Alternate gene names: 195952624

Gene position: 217272-217943 (Clockwise)

Preceding gene: 195952623

Following gene: 195952628

Centisome position: 13.93

GC content: 35.42

Gene sequence:

>672_bases
TTGGCCTTTGAGGATTTTATACCAAGAAATCTTCTAAAAGCTTTGGAAAACATAAAACATATACCTGGCTATGGTGAAAA
AAACGCTTCAAGGTTTGTATACGGCTTTTTAAAGCTTGATAAAATCAAAAAAGAAGATATCGTAAAAAGCTTAGAAAATC
TTTTTTCTATAACTACATGTAAAGAGTGCAACATACTTACAGATCAAGAAGTTTGTGCTATATGCTCTAATCCAAAAAGA
AGTAAAAAGTATATAGCTGTAGTAGAAGAGTCTCAAGATGCTTACAAGATAGAAAAATTGGAGCGTTTTAAAGGTGTTTA
TCATATTTTAGGTGGTCGTATAAGTCCACTGGAGGGTATAGCACCAGAAGATTTGAGTATAGAGCTTTTAAAAGAAAGAA
TAAGAAAATACAATCCGAAGGAGATAATAATAGCCACAAATCCAAACCCGGAGGGTGAGGCTACAGCTAACTATCTTATA
AAAATAATAAAAAGCTTAAACAATAAATCTGCTACAAGTATGCCACGCACCACAAGTATGCCACGCACCACAAGTCTACC
ACGGTCTACTACACCGAAGATAACACGCATAGCCACCGCTATCCAGTTTGGTACGCTTATAGAGTATGTGGACGATCTAT
CTTTGGAAGAGAGCATAGAAAAAAGGGAATAG

Upstream 100 bases:

>100_bases
TTTAAGGATGATCTTAAAAGCCTAATAGAAGAATACCAGGATATGGTAAAAGAGAATCTTACTAAAGCTATGAAAGATAG
ATTGTTAGGGAGTATCCCTT

Downstream 100 bases:

>100_bases
TGTGCCAAAGGCATTTCTCTGAGCTTTTGAGTGTCTTTGCATGTTCATTAGATCCGAAACGCGCTGATAGCGCTCTAGTG
TGCCAAAGGCATTTCTCTGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MAFEDFIPRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLFSITTCKECNILTDQEVCAICSNPKR
SKKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAPEDLSIELLKERIRKYNPKEIIIATNPNPEGEATANYLI
KIIKSLNNKSATSMPRTTSMPRTTSLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKRE

Sequences:

>Translated_223_residues
MAFEDFIPRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLFSITTCKECNILTDQEVCAICSNPKR
SKKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAPEDLSIELLKERIRKYNPKEIIIATNPNPEGEATANYLI
KIIKSLNNKSATSMPRTTSMPRTTSLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKRE
>Mature_222_residues
AFEDFIPRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLFSITTCKECNILTDQEVCAICSNPKRS
KKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAPEDLSIELLKERIRKYNPKEIIIATNPNPEGEATANYLIK
IIKSLNNKSATSMPRTTSMPRTTSLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKRE

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=215, Percent_Identity=33.4883720930233, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 25313; Mature: 25181

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEDFIPRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLFSITTC
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KECNILTDQEVCAICSNPKRSKKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGI
CCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APEDLSIELLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTSM
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PRTTSLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKRE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
AFEDFIPRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLFSITTC
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KECNILTDQEVCAICSNPKRSKKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGI
CCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APEDLSIELLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTSM
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PRTTSLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKRE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]