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The map label for this gene is mcp1 [H]

Identifier: 195952575

GI number: 195952575

Start: 172077

End: 172442

Strand: Direct

Name: mcp1 [H]

Synonym: HY04AAS1_0195

Alternate gene names: 195952575

Gene position: 172077-172442 (Clockwise)

Preceding gene: 195952574

Following gene: 195952576

Centisome position: 11.03

GC content: 38.8

Gene sequence:

>366_bases
ATGGAAGAGCAATTTCAACAACAAGCCCATGATTTAGTAGATGCGGGAAAAAACGAGACGACACTAACACGGGATGAAAA
TTCTAATCTAAGCAAAAAAGATATTGTAAAAGAGGCTGTTAAAGAGACCGAAGAGATAAAAGAGATGGTAGATAGTCTTT
CTAAGATAGCCAAGCAAACAAACTTACTTGCTTTAAACGCTGCCATAGAGGCAGCTAGAGTCGGTGAAGTTGGCAAGGGC
TTTGCGGTGGTGGCTTCTGAGTTTAGAAAGCTCGCAGAAAATACAAACAAAATAGCCACCAACATAAAAAGGCTTATGCT
TTCTATAGAAGAAAAGCTTGACACTCTTAATAAAGAAGAGGTCTAA

Upstream 100 bases:

>100_bases
ACTTATAGAGCTTACAGATTATTCTTCTACTATTGTAGATAAAATAACAAGCCTTGCAGAAAGTTTAAAAGGATGTTAAA
GTAAAAGAGGAGGTGTAAAT

Downstream 100 bases:

>100_bases
GGAGGGCTTAGTATGGAAAGCGGCATAGTAGATCGTGGCAGACTTGATGATCGTGGCACCCTTGATGATCGTGGCACCCT
TGTAGCTCCTAAAAAATCAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEEQFQQQAHDLVDAGKNETTLTRDENSNLSKKDIVKEAVKETEEIKEMVDSLSKIAKQTNLLALNAAIEAARVGEVGKG
FAVVASEFRKLAENTNKIATNIKRLMLSIEEKLDTLNKEEV

Sequences:

>Translated_121_residues
MEEQFQQQAHDLVDAGKNETTLTRDENSNLSKKDIVKEAVKETEEIKEMVDSLSKIAKQTNLLALNAAIEAARVGEVGKG
FAVVASEFRKLAENTNKIATNIKRLMLSIEEKLDTLNKEEV
>Mature_121_residues
MEEQFQQQAHDLVDAGKNETTLTRDENSNLSKKDIVKEAVKETEEIKEMVDSLSKIAKQTNLLALNAAIEAARVGEVGKG
FAVVASEFRKLAENTNKIATNIKRLMLSIEEKLDTLNKEEV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=80, Percent_Identity=45, Blast_Score=68, Evalue=1e-13,
Organism=Escherichia coli, GI1788194, Length=79, Percent_Identity=46.8354430379747, Blast_Score=68, Evalue=1e-13,
Organism=Escherichia coli, GI1789453, Length=64, Percent_Identity=53.125, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI2367378, Length=64, Percent_Identity=51.5625, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1787690, Length=79, Percent_Identity=49.3670886075949, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 13488; Mature: 13488

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEQFQQQAHDLVDAGKNETTLTRDENSNLSKKDIVKEAVKETEEIKEMVDSLSKIAKQT
CCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLALNAAIEAARVGEVGKGFAVVASEFRKLAENTNKIATNIKRLMLSIEEKLDTLNKEE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
V
C
>Mature Secondary Structure
MEEQFQQQAHDLVDAGKNETTLTRDENSNLSKKDIVKEAVKETEEIKEMVDSLSKIAKQT
CCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLALNAAIEAARVGEVGKGFAVVASEFRKLAENTNKIATNIKRLMLSIEEKLDTLNKEE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]