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The map label for this gene is lppB [H]

Identifier: 195952544

GI number: 195952544

Start: 148358

End: 149419

Strand: Direct

Name: lppB [H]

Synonym: HY04AAS1_0164

Alternate gene names: 195952544

Gene position: 148358-149419 (Clockwise)

Preceding gene: 195952543

Following gene: 195952545

Centisome position: 9.51

GC content: 37.38

Gene sequence:

>1062_bases
ATGAAGATTATCCAAAAAGCTTTGATATTTTGTATTAGTCTGGGGCTTTTGACGTGGCAAGCTAAGGCTTATGAGTGTCA
TTATTACAAGATAAGAAAAGGGGACACTATAGACGGTATTGCTCTCAAGTTTCACGTTTATACAAAATCCATAAAAGAGG
CAAACCCTTCTCTTAGGAGACATAAATTTTTGTCTATAGGGCAAAAAATCTGTATCCCTTATAAACCAAAAAGACCAAGA
ATACCTACCATGGGCTATAAAGTAAAAAGCGGTGATACATTGTCGGTTTTGGCGAAGCGTTTTGGTACATCTATAAGGGA
GTTAAAAGAGCTAAACAACCTTCATAGAAATTTTCTAAGGGCAGGAGAGACTATAAAAGTTCCTTACAATACGAAGTATG
TAGAGAGATACGAAGGCAGAAAGTACAAACTTTATATTATCAAAAACGGTGGTACCCTAAGAGACGTTTCAGATGTTACT
GGTGTACCTTTAAGAATACTTGAAAAATTAAACCCAGACTTGATGGACAAATACCTTGGCAAAGGAGTTGTAGTAAAGCT
TGGCAAAAAGCATATCACCTATAAAAAAATTATAGCAAGAGCTAAAAAGCGTTATAAAGAACATTATAGGACTAAACCGC
TACCAAGCCAACCAAACAATCTAAAAGCCCTTACTCAAGAAGAGGCTAATTCTCAATCAACGTTGCATAAACATGTAAAT
ATACCACTACCCGTAGAAGGCCAGATACAAAGGGCCCAAAGGGGCATAAATATCGTTACCGCCTGTGGAAATCCGGTAAA
AACTATAAACTCAGGCATAGTGGTATATAGTGGTGATGATTTGGTAGCTTACGGCAATATGGCTATAGTGGATGGTGGAG
GTATTATAACGGTTTACGCTTATAACCAAAAGCTTTTTGTAAAGAAAGGTCAGATGGTAAATAAAGGTCAAACCATAGGT
TTGGTGGGGACAAAGCCTGGCACTTCTATTTGTGAGCTTCACTTTGAATTAAGAAGCAAAGACGGCACTCCTATAGACCC
TATTACTTACTTTGGTAGATAG

Upstream 100 bases:

>100_bases
GGAGAGAAAGAAGCTCTTGAGATGTTTTTAGAAAAGCTAAAAGAAGGTCCAAAACATGCCTTTGTATCTGATATAAAATA
TAACATGGAGGTTTTTGAAG

Downstream 100 bases:

>100_bases
TTTGTTATAATATATTTAAACTTTAAAGGAGGTTTGTTATGGATTTAAGCAAGATAGTAAGTAAAAATCCGCCTGATGAT
ATCTACGCTTTTATAGAGAT

Product: Peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKIIQKALIFCISLGLLTWQAKAYECHYYKIRKGDTIDGIALKFHVYTKSIKEANPSLRRHKFLSIGQKICIPYKPKRPR
IPTMGYKVKSGDTLSVLAKRFGTSIRELKELNNLHRNFLRAGETIKVPYNTKYVERYEGRKYKLYIIKNGGTLRDVSDVT
GVPLRILEKLNPDLMDKYLGKGVVVKLGKKHITYKKIIARAKKRYKEHYRTKPLPSQPNNLKALTQEEANSQSTLHKHVN
IPLPVEGQIQRAQRGINIVTACGNPVKTINSGIVVYSGDDLVAYGNMAIVDGGGIITVYAYNQKLFVKKGQMVNKGQTIG
LVGTKPGTSICELHFELRSKDGTPIDPITYFGR

Sequences:

>Translated_353_residues
MKIIQKALIFCISLGLLTWQAKAYECHYYKIRKGDTIDGIALKFHVYTKSIKEANPSLRRHKFLSIGQKICIPYKPKRPR
IPTMGYKVKSGDTLSVLAKRFGTSIRELKELNNLHRNFLRAGETIKVPYNTKYVERYEGRKYKLYIIKNGGTLRDVSDVT
GVPLRILEKLNPDLMDKYLGKGVVVKLGKKHITYKKIIARAKKRYKEHYRTKPLPSQPNNLKALTQEEANSQSTLHKHVN
IPLPVEGQIQRAQRGINIVTACGNPVKTINSGIVVYSGDDLVAYGNMAIVDGGGIITVYAYNQKLFVKKGQMVNKGQTIG
LVGTKPGTSICELHFELRSKDGTPIDPITYFGR
>Mature_353_residues
MKIIQKALIFCISLGLLTWQAKAYECHYYKIRKGDTIDGIALKFHVYTKSIKEANPSLRRHKFLSIGQKICIPYKPKRPR
IPTMGYKVKSGDTLSVLAKRFGTSIRELKELNNLHRNFLRAGETIKVPYNTKYVERYEGRKYKLYIIKNGGTLRDVSDVT
GVPLRILEKLNPDLMDKYLGKGVVVKLGKKHITYKKIIARAKKRYKEHYRTKPLPSQPNNLKALTQEEANSQSTLHKHVN
IPLPVEGQIQRAQRGINIVTACGNPVKTINSGIVVYSGDDLVAYGNMAIVDGGGIITVYAYNQKLFVKKGQMVNKGQTIG
LVGTKPGTSICELHFELRSKDGTPIDPITYFGR

Specific function: May be a virulence determinant [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=209, Percent_Identity=29.1866028708134, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789099, Length=117, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 39834; Mature: 39834

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIQKALIFCISLGLLTWQAKAYECHYYKIRKGDTIDGIALKFHVYTKSIKEANPSLRR
CHHHHHHHHHHHHHHHHEEECEEEEEEEEEEECCCCCCCEEEEEEEEEHHHHHCCCHHHH
HKFLSIGQKICIPYKPKRPRIPTMGYKVKSGDTLSVLAKRFGTSIRELKELNNLHRNFLR
HHHHHCCCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AGETIKVPYNTKYVERYEGRKYKLYIIKNGGTLRDVSDVTGVPLRILEKLNPDLMDKYLG
CCCEEECCCCCHHHHHCCCCEEEEEEEECCCCEECCHHCCCCHHHHHHHCCHHHHHHHHC
KGVVVKLGKKHITYKKIIARAKKRYKEHYRTKPLPSQPNNLKALTQEEANSQSTLHKHVN
CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCC
IPLPVEGQIQRAQRGINIVTACGNPVKTINSGIVVYSGDDLVAYGNMAIVDGGGIITVYA
CCCCCCCHHHHHHCCCEEEEECCCCHHHHCCCEEEECCCCEEEECCEEEEECCCEEEEEE
YNQKLFVKKGQMVNKGQTIGLVGTKPGTSICELHFELRSKDGTPIDPITYFGR
ECCEEEEECCCEECCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIIQKALIFCISLGLLTWQAKAYECHYYKIRKGDTIDGIALKFHVYTKSIKEANPSLRR
CHHHHHHHHHHHHHHHHEEECEEEEEEEEEEECCCCCCCEEEEEEEEEHHHHHCCCHHHH
HKFLSIGQKICIPYKPKRPRIPTMGYKVKSGDTLSVLAKRFGTSIRELKELNNLHRNFLR
HHHHHCCCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AGETIKVPYNTKYVERYEGRKYKLYIIKNGGTLRDVSDVTGVPLRILEKLNPDLMDKYLG
CCCEEECCCCCHHHHHCCCCEEEEEEEECCCCEECCHHCCCCHHHHHHHCCHHHHHHHHC
KGVVVKLGKKHITYKKIIARAKKRYKEHYRTKPLPSQPNNLKALTQEEANSQSTLHKHVN
CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCC
IPLPVEGQIQRAQRGINIVTACGNPVKTINSGIVVYSGDDLVAYGNMAIVDGGGIITVYA
CCCCCCCHHHHHHCCCEEEEECCCCHHHHCCCEEEECCCCEEEECCEEEEECCCEEEEEE
YNQKLFVKKGQMVNKGQTIGLVGTKPGTSICELHFELRSKDGTPIDPITYFGR
ECCEEEEECCCEECCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]