| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952505
Identifier: 195952505
GI number: 195952505
Start: 112247
End: 113533
Strand: Direct
Name: 195952505
Synonym: HY04AAS1_0125
Alternate gene names: NA
Gene position: 112247-113533 (Clockwise)
Preceding gene: 195952504
Following gene: 195952506
Centisome position: 7.2
GC content: 40.17
Gene sequence:
>1287_bases ATGGCAAAAAGAGTGGTTATTATAGGCGGTGGTGTAGGTGGCGTATCTACCGCTTACAATTTAAGGAAATTAGACGCTAA CATTGATATCAAAGTAGTTTCTGGAAGACCTTACTTTGGTTTTACACCGGCGTTTCCTCATTTGGCTATAGGATGGCGTA AATTTGGTGACATATCAACGCCTCTTCAACCTGTTTTGAAGAAAAAGAACATAGATTTTATAAATGAAGACGCTGAGAAG ATAGACCCGGATGCCAACAAAGTAACTTTAAAAAGTGGTAAAGTGTTAGAATACGATTATCTTGTAATAGCCACCGGCCC AAAGCTTGTATTTACAGAGGGCCAAGAGGAAAATGGACATTCTGTATGTACAGTGGATCACGCTTTAGAGCTCAACAAAG CTTTGGAAAAGTTTTTTGAAAAACCAGGTCCAGTGGTGGTTGGTGCTAAACCAGGTACTAGCTGTTTTGGCCCAGGGTAT GAATTTGCTTTTATGCTACATTATGAAGCAAAGAAAAGAGGCTTAAGGCATAAGTTCCCAATCCATTATATAACTTCTGA GCCGTTTTTGGGTCATCTCGGTTTAGGTGGTGTTGGAACCTCAAGAAGGGTTATGGAAGATCTGATGGCCGAAAGGGATA TAAGACCTATTATAAATGTAAAAACAAAAAAAGTAAACCCTAACTCTGTAGTTTATGAGGATTTAAATGGCAAAGAATAT GAGGTAGAATCTTCTTTTACTATGCTTATGCCAAGTTTTATGGGTACAGATGTAGTAGCAAGCGCTGGTGATAAAGTAGC AAATCCGGCCAACAAGATGGTTATAGTGGATAAGTGCTTCAACAATCCAAATTATAGAAACATATACGGTGTTGGTGTAG TAGCTGCTATACCTCCAGTAGAACAAACTCCAGTGCCTACCGGTACTCCAAAAACTGGTCAAATGATAGAGGGTATGGCT TTGGCCACCGCTTTAAACATAGTATCTGATATAAGAAACAGCTCAGAAAGGTATATGCCTACTTTGGCCGCTATATGTAT AGCTGATATGGGTAACGATGCCGCTGGTTTTATAGCCTATCCAGTTATACCACCAAGAGCTTGGACCTTGCAAAAAAGGA GTAAATGGATGCACTGGGTAAAGAGCGGTTTTGAAAAATACTTCTTGTGGAAGGTAAAGACCGGTGATGTAGAGCCATGG TTTGAAAAGATGGGTCTTGAGGCTATGTTTAATCTTCACTTAGTAGAGCCATGTCCTGATTGCAGCGGTGTGCCAGGGAA ACAATAA
Upstream 100 bases:
>100_bases TTATATATAAGAAAGATTTATTTTCTTATAAGATATATTTATTTACTTATATGTATGTAGTTATATTATAATTAAGTATT ATCTAACTTTAGGAGGTATT
Downstream 100 bases:
>100_bases CACTTGAAAAATTTTTTTTATATGTTATTATATTATTAAGGAGGTGAAGTTATGTATTTAGGATTTAAGCTTTCTATGTT TTTGGCAATTATATTTTATG
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Quinone Reductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide-Quinone Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Dehydrogenase; Sulfide Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide-Quinone Reductase Related Protein; Flavoprotein Reductase; Sulfide Dehydrogenase Related Protein
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MAKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDISTPLQPVLKKKNIDFINEDAEK IDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGHSVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGY EFAFMLHYEAKKRGLRHKFPIHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPVEQTPVPTGTPKTGQMIEGMA LATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAYPVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPW FEKMGLEAMFNLHLVEPCPDCSGVPGKQ
Sequences:
>Translated_428_residues MAKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDISTPLQPVLKKKNIDFINEDAEK IDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGHSVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGY EFAFMLHYEAKKRGLRHKFPIHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPVEQTPVPTGTPKTGQMIEGMA LATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAYPVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPW FEKMGLEAMFNLHLVEPCPDCSGVPGKQ >Mature_427_residues AKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDISTPLQPVLKKKNIDFINEDAEKI DPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGHSVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGYE FAFMLHYEAKKRGLRHKFPIHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEYE VESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPVEQTPVPTGTPKTGQMIEGMAL ATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAYPVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPWF EKMGLEAMFNLHLVEPCPDCSGVPGKQ
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24657386, Length=280, Percent_Identity=26.4285714285714, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24657391, Length=280, Percent_Identity=26.4285714285714, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47164; Mature: 47033
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDIST CCCEEEEEECCCCCCHHHCEEEEECCCEEEEEECCCCCCCCCCCCCCHHCCHHHCCCCCC PLQPVLKKKNIDFINEDAEKIDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGH CHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCC SVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGYEFAFMLHYEAKKRGLRHKFP EEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCC IHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY EEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCEE EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPV EECCCHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCC EQTPVPTGTPKTGQMIEGMALATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEE PVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPWFEKMGLEAMFNLHLVEPCPD CCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCHHEEEEEEEECCCCC CSGVPGKQ CCCCCCCC >Mature Secondary Structure AKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDIST CCEEEEEECCCCCCHHHCEEEEECCCEEEEEECCCCCCCCCCCCCCHHCCHHHCCCCCC PLQPVLKKKNIDFINEDAEKIDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGH CHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCC SVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGYEFAFMLHYEAKKRGLRHKFP EEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCC IHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY EEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCEE EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPV EECCCHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCC EQTPVPTGTPKTGQMIEGMALATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEE PVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPWFEKMGLEAMFNLHLVEPCPD CCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCHHEEEEEEEECCCCC CSGVPGKQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA