Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952474

Identifier: 195952474

GI number: 195952474

Start: 87375

End: 87773

Strand: Direct

Name: 195952474

Synonym: HY04AAS1_0094

Alternate gene names: NA

Gene position: 87375-87773 (Clockwise)

Preceding gene: 195952473

Following gene: 195952475

Centisome position: 5.6

GC content: 29.57

Gene sequence:

>399_bases
ATGACCAACATAGTTCTTTTCATGATAAGCACATGGTTTGGTGTTAGTTTGTTTTTTAGCTTTGATGTGGCCCCCACTCT
TTTTGATACGCTTTCTACCATGTTGGCTGGTGATGTGGTGGCAAAAATATTTCCAATGTATTTTGGTATTGGACTTTTTA
TATTTCTTATGAGTTTTTTTATTTTGTTTTTAAGTGAAAAGCCAACATTCAGAAAAAACTTCGCTTTTTTGATATTAAAT
ATAGTTATTTTCATAGCTTTTCTTGTTTTTATATTGCCAGAGGCCTCTTTTTTAAAACATACAGATTATCACGCATTCCT
TCGTTTACACGCTTTTAGTATGGTATTAAATCTTATACAAATGATAAATAGCTTTTTTATAATACTAAGTTTGATATGA

Upstream 100 bases:

>100_bases
GGATTAATGTCCTTGATATACAAAACAGTATTTTTTTATTGGAAAAGCCCGTAAACTTTGAAAATATAAACAACATATAC
AAGGATATTCTTTCTTTGTT

Downstream 100 bases:

>100_bases
CAAGGCTTGGTGTACTTGGTTCTACGGGGACTATTGGGAAAAATGCCCTTGATATTGTTAGATCAAACAAAGATAAGATA
GAGCTTATAGGTATAGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFFILFLSEKPTFRKNFAFLILN
IVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQMINSFFIILSLI

Sequences:

>Translated_132_residues
MTNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFFILFLSEKPTFRKNFAFLILN
IVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQMINSFFIILSLI
>Mature_131_residues
TNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFFILFLSEKPTFRKNFAFLILNI
VIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQMINSFFIILSLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15266; Mature: 15135

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFF
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFLSEKPTFRKNFAFLILNIVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MINSFFIILSLI
HHHHHHHHHHCC
>Mature Secondary Structure 
TNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFF
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFLSEKPTFRKNFAFLILNIVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MINSFFIILSLI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]