Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952471

Identifier: 195952471

GI number: 195952471

Start: 85619

End: 86767

Strand: Direct

Name: 195952471

Synonym: HY04AAS1_0091

Alternate gene names: NA

Gene position: 85619-86767 (Clockwise)

Preceding gene: 195952470

Following gene: 195952472

Centisome position: 5.49

GC content: 41.34

Gene sequence:

>1149_bases
ATGAAATTACCACCACTTAGAATAAGGCATATAGAGGTGGAGATACCTATTATACAAGGGGGTATGGGCGTAGGTATTTC
TTGGGAAAAATTGGCAGGGGCTGTTGCATCCTGCGGTGCTGTAGGTGTTGTATCCTCAGTGGGTACAGGTTATAGATTTT
TAGAACTTGTTAAAAAAGATAAGTTTGGAAGACCGATAGGCACTGAAAATGCTCACAACGGCGAGGCTTTGAGGCTCATT
ATTCAAAAAGCCAGAGAAATAGCCGGTGGCAAAGGCGCCATAGGTGTAAATATACTATCTGCTATAAACGATTACGGTAG
GGTAGCAAACGAAGCTGCCAAGTTTGGAGCTGATTTAATCATATCTGGAGCAGGACTTCCTTTGAAGTTGCCAGAGTATA
CAGAGGGGTATGATACGGCTTTGGTGCCTATAGTATCTTCTGCTAGGGCTTTAAACCTTATAGCCAAAACATGGAAAAAG
CGCTATAACAGGTTACCAGATGCTGTCGTTTTGGAAGGTCCCATGTCTGGTGGTCATCAAGGTTTTAAGTATGAAGATTG
TTTTAAGCCGGAATTTCAACTTGAAAATTTGTTTGATGAGGTTTACAAAGAGGCTCAAGAATGGGGTAATATACCTCTTA
TAGTGGCAGGTGGTGTTTGGGATTACAAAGATATAAAAACCTACATTCAAAGAGGTGCTGTCGGTGTTCAGATGGCCACC
AGGTTTGCAGTTACAAAAGAAAGCGATGCACCGCTTGTATACAAGGAGCTTCTTTTAAACGCTGAAGAAAAGGATATAAT
GCTTCTAAAATCGCCGGTGGGATATCCTTTGAGGGTTATAAAAACGCCTTTTGTGGAAAAGCTTTTAAACGGATACAACG
GCTGGAAAGGATGCGTTTCTGATTGCGTGGCCCCTTGTAAGCATGGAGAGGAGGCTAAAAAAGTAGGTTTTTGTATAGCC
GATAGGCTTGGAGCTGCTTGTCTTGGCAATGTAGAAGAAGGTATTTTTATAAGCGGTGCCAACGGATATAAGTTGAAAAA
GCAAGGTATAATATCTGTCTGTGAGCTTATAGATATGCTTACTGGTAAAATGCCAGACCCCACTATAGATACTGTAGAAA
ACAAAGAGACATTTACAGAGGTGATATAA

Upstream 100 bases:

>100_bases
TTTATGATATTTACCCATATGAGGCATTTCAGACATTGAAGCTTTGCAAATTTGAGAATTGTTTTTATATTTTATGTATA
TCCAATAGTGAGAGGTTTTT

Downstream 100 bases:

>100_bases
GTGAGGTTTTATGGGCTTTTAAAAGATGAAGATTTTTTAAATATTGTGCAAAAAATCTCTGGTGATAATTGGATTATAGA
AGATACAAAATCAAAAACAA

Product: 2-nitropropane dioxygenase NPD

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; Oxidoreductase; Enoyl-[Acyl-Carrier-Protein] Reductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase-Like; Enoyl-ACP Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Trans-2-Enoyl-ACP Reductase II; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKDKFGRPIGTENAHNGEALRLI
IQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLIISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKK
RYNRLPDAVVLEGPMSGGHQGFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT
RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVSDCVAPCKHGEEAKKVGFCIA
DRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDMLTGKMPDPTIDTVENKETFTEVI

Sequences:

>Translated_382_residues
MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKDKFGRPIGTENAHNGEALRLI
IQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLIISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKK
RYNRLPDAVVLEGPMSGGHQGFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT
RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVSDCVAPCKHGEEAKKVGFCIA
DRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDMLTGKMPDPTIDTVENKETFTEVI
>Mature_382_residues
MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKDKFGRPIGTENAHNGEALRLI
IQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLIISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKK
RYNRLPDAVVLEGPMSGGHQGFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT
RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVSDCVAPCKHGEEAKKVGFCIA
DRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDMLTGKMPDPTIDTVENKETFTEVI

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41479; Mature: 41479

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKD
CCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH
KFGRPIGTENAHNGEALRLIIQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
ISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKKRYNRLPDAVVLEGPMSGGHQ
EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
GFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHH
RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVS
HEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHCCCCCHHHHHH
DCVAPCKHGEEAKKVGFCIADRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDML
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHHH
TGKMPDPTIDTVENKETFTEVI
HCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKD
CCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH
KFGRPIGTENAHNGEALRLIIQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
ISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKKRYNRLPDAVVLEGPMSGGHQ
EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
GFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHH
RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVS
HEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHCCCCCHHHHHH
DCVAPCKHGEEAKKVGFCIADRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDML
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHHH
TGKMPDPTIDTVENKETFTEVI
HCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA