Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is mcp3 [H]

Identifier: 195952435

GI number: 195952435

Start: 49700

End: 51844

Strand: Direct

Name: mcp3 [H]

Synonym: HY04AAS1_0055

Alternate gene names: 195952435

Gene position: 49700-51844 (Clockwise)

Preceding gene: 195952411

Following gene: 195952436

Centisome position: 3.19

GC content: 33.24

Gene sequence:

>2145_bases
ATGACAAATATATCAGTGAAGACAAAGCTTTATATCTTGGGTGCAATAGTGGCTTTTTTTGGTGTTGTTATAGGGGCTAT
CGTCTTTTATAATACCCATAAAGCAGTAGCTCAAATGGACCAAGAAAAGTATTGTCTTAAAGTAGCCGATCCTCTTTATG
AGATGCTTATAGAACTTCAAACGGCTAGGATGTATAATAAGTCTTTGGCGGTGGGTGATAAAAGCTATAAAACACCTTTG
GAAAATACTTTTAACAAAATAGACAAGATTTTATCAAAACTTTCTTTATTGGATAAAAAATATGGGAAAAAACTTGATAT
GAACAAAAGTTTTGCTGAGCTTTTATCTATGTATGACAACCTTAAGCAAAATGCTTATAGTTTTAATCCGTATCAAGTGA
ATAAAAATTATGATACCATATCTAACTTTTTAACAGATAAACTTATTATAAGAGATTGTTATATAAGAGGAAAACTTATC
AAAGATCCTGATTTTGCGGATTCTACTGCCATAACTGGATTTTTTGGAAATCAGCCTCATATTATTTTAAAAGTCGGTAA
ACTTCAAAGTAAATCTTTTGAGCTTATAAATATATCTAAACAAAACGCAACTTCAAACACTGCTCAAAGTACAAATTCAA
CATCAAACCTAAACAATAGCTTAAACCAACAGAGCGCTTCTAATCAACAAAACACATATATACACCATTTGGTTATGGAT
ATCTCAAGTTTGTTGAGCAGCATAAGAGAACATATTCATTACGCTTGTTTATTTTACAACGAGAGCGCCAGAGCCAATAA
GTTTTACAACGAAATACATCTGTCTGCCAACGCTTATAAAAGATATATAAACGATACTTTTAAACCCATTATAGAAAAAA
TATTGGATAATCCAGAGAGTGCCTATATTTACAAAGAGCAGTTTGTGAGCTCTCTTTCAAAGCTACAAACTCTTTCTAAC
GCATTATCAAGAGATACAATTCATACGTTAGAAAAATCTGTAAATATTAGAGATGCAAAAGACCATGAAGTACTTTATGT
AAGTCTATTTGTGGTAAGTATAGGCATAGTATTATCTATGTGGTTTGTATATTTGACGATAAAGAGTATAGATAACAACG
TAAGTATATTAAATAGAGTTGCAAATGAATTTAAAAACGGTAATCTAAATATAAAAGCTGAGATACGTTATCAAGATGAA
ATAGGTAAGGCAATAGAAAGTTTGGTAGATGGAGTTGGTACGGCAAACAGCATATTGCAAGATATAAAATCTACTATCGA
GAGAATGGGAAGCTTAGATTTTACTAAAAATGTAGAGACTGATGCGGTAGGAGATTTTGAAGCTATCAAAAATGATGTCA
ACAAGTCTTTGGACGCTTTGAGAAAACTATTGCAAGCTATAACAGAAAGCGTTGTAAAACTAGGTACAAGCATGGAAGAA
ACATCTGCCACTACAAACGCTTTGGCTTTAGACAATAAAAATCTCAACGAGCAGATAAATGCGTTGGCAAATTCTATAGA
AGAGATATCTGCTACTGTTAACTCTATAGCCTCAAACATGACAGATACAAAAAATATCATAAACAAACTTTTTGAAATAG
TAAACAAAGGAAAATTGGCGATAAATCAAACAAGAGTTGATGCTGATATGATGAGTGAGCTGGCAAAAAAGGCAGTCTCC
ATTGTAGATTCTATAGTGTTTATAACAGAACAGACAAATCTTTTAGCTTTAAACGCTGCCATAGAAGCGGCCCGTGCAGG
GGAAGCTGGGAGAGGATTCGCCGTTGTGGCAGATGAGGTGAAGAAACTGGCTGAAAAAGCCGGTGGTTTTGCAAAGAACG
TATCAGATATTATATCTGATATAACAAAAGGTGTAAATTCAACTGTTAAGTCTATATTGATGGTAGACGATTATTATAAA
GATATAGAAAATTATACATCTAACGTACAAGAAGCTTCTCAATCCATATCTTCTGCCATAGAAGAGCAAAACGCTACTTT
GAACATGCTAAACAACTCCATGTTAGATGTGAGGACGTTTTCTGACAAATTGGCGGCAGCTATAGAAGAGCTTTCAGCTA
CAGCAAAGTCATTGGCTGATGTAGCTCAAGAGCTTAAAATAGAAGTTACTAAATTTAAGTTTTAG

Upstream 100 bases:

>100_bases
TAAGTGTATTATAAATATTTTTATATTTCAATTCTGCTGCATTTCATACAAAAAAAAACGATTTATAATAGCAGGAAATT
TTATATAAGTGGAGGTTAAT

Downstream 100 bases:

>100_bases
GATTTTGGTATGAAAAAGGTTATTTTTGCTTTGGCTTTTTGTTTTATGGCATCTAACTCTTACGGTGTTTTATTAAAAGC
TTCAAACGATAAATTTGCAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 713

Protein sequence:

>714_residues
MTNISVKTKLYILGAIVAFFGVVIGAIVFYNTHKAVAQMDQEKYCLKVADPLYEMLIELQTARMYNKSLAVGDKSYKTPL
ENTFNKIDKILSKLSLLDKKYGKKLDMNKSFAELLSMYDNLKQNAYSFNPYQVNKNYDTISNFLTDKLIIRDCYIRGKLI
KDPDFADSTAITGFFGNQPHIILKVGKLQSKSFELINISKQNATSNTAQSTNSTSNLNNSLNQQSASNQQNTYIHHLVMD
ISSLLSSIREHIHYACLFYNESARANKFYNEIHLSANAYKRYINDTFKPIIEKILDNPESAYIYKEQFVSSLSKLQTLSN
ALSRDTIHTLEKSVNIRDAKDHEVLYVSLFVVSIGIVLSMWFVYLTIKSIDNNVSILNRVANEFKNGNLNIKAEIRYQDE
IGKAIESLVDGVGTANSILQDIKSTIERMGSLDFTKNVETDAVGDFEAIKNDVNKSLDALRKLLQAITESVVKLGTSMEE
TSATTNALALDNKNLNEQINALANSIEEISATVNSIASNMTDTKNIINKLFEIVNKGKLAINQTRVDADMMSELAKKAVS
IVDSIVFITEQTNLLALNAAIEAARAGEAGRGFAVVADEVKKLAEKAGGFAKNVSDIISDITKGVNSTVKSILMVDDYYK
DIENYTSNVQEASQSISSAIEEQNATLNMLNNSMLDVRTFSDKLAAAIEELSATAKSLADVAQELKIEVTKFKF

Sequences:

>Translated_714_residues
MTNISVKTKLYILGAIVAFFGVVIGAIVFYNTHKAVAQMDQEKYCLKVADPLYEMLIELQTARMYNKSLAVGDKSYKTPL
ENTFNKIDKILSKLSLLDKKYGKKLDMNKSFAELLSMYDNLKQNAYSFNPYQVNKNYDTISNFLTDKLIIRDCYIRGKLI
KDPDFADSTAITGFFGNQPHIILKVGKLQSKSFELINISKQNATSNTAQSTNSTSNLNNSLNQQSASNQQNTYIHHLVMD
ISSLLSSIREHIHYACLFYNESARANKFYNEIHLSANAYKRYINDTFKPIIEKILDNPESAYIYKEQFVSSLSKLQTLSN
ALSRDTIHTLEKSVNIRDAKDHEVLYVSLFVVSIGIVLSMWFVYLTIKSIDNNVSILNRVANEFKNGNLNIKAEIRYQDE
IGKAIESLVDGVGTANSILQDIKSTIERMGSLDFTKNVETDAVGDFEAIKNDVNKSLDALRKLLQAITESVVKLGTSMEE
TSATTNALALDNKNLNEQINALANSIEEISATVNSIASNMTDTKNIINKLFEIVNKGKLAINQTRVDADMMSELAKKAVS
IVDSIVFITEQTNLLALNAAIEAARAGEAGRGFAVVADEVKKLAEKAGGFAKNVSDIISDITKGVNSTVKSILMVDDYYK
DIENYTSNVQEASQSISSAIEEQNATLNMLNNSMLDVRTFSDKLAAAIEELSATAKSLADVAQELKIEVTKFKF
>Mature_713_residues
TNISVKTKLYILGAIVAFFGVVIGAIVFYNTHKAVAQMDQEKYCLKVADPLYEMLIELQTARMYNKSLAVGDKSYKTPLE
NTFNKIDKILSKLSLLDKKYGKKLDMNKSFAELLSMYDNLKQNAYSFNPYQVNKNYDTISNFLTDKLIIRDCYIRGKLIK
DPDFADSTAITGFFGNQPHIILKVGKLQSKSFELINISKQNATSNTAQSTNSTSNLNNSLNQQSASNQQNTYIHHLVMDI
SSLLSSIREHIHYACLFYNESARANKFYNEIHLSANAYKRYINDTFKPIIEKILDNPESAYIYKEQFVSSLSKLQTLSNA
LSRDTIHTLEKSVNIRDAKDHEVLYVSLFVVSIGIVLSMWFVYLTIKSIDNNVSILNRVANEFKNGNLNIKAEIRYQDEI
GKAIESLVDGVGTANSILQDIKSTIERMGSLDFTKNVETDAVGDFEAIKNDVNKSLDALRKLLQAITESVVKLGTSMEET
SATTNALALDNKNLNEQINALANSIEEISATVNSIASNMTDTKNIINKLFEIVNKGKLAINQTRVDADMMSELAKKAVSI
VDSIVFITEQTNLLALNAAIEAARAGEAGRGFAVVADEVKKLAEKAGGFAKNVSDIISDITKGVNSTVKSILMVDDYYKD
IENYTSNVQEASQSISSAIEEQNATLNMLNNSMLDVRTFSDKLAAAIEELSATAKSLADVAQELKIEVTKFKF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=306, Percent_Identity=28.4313725490196, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI2367378, Length=389, Percent_Identity=25.4498714652956, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1788194, Length=278, Percent_Identity=28.4172661870504, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788195, Length=227, Percent_Identity=30.3964757709251, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1789453, Length=230, Percent_Identity=29.1304347826087, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 79375; Mature: 79244

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNISVKTKLYILGAIVAFFGVVIGAIVFYNTHKAVAQMDQEKYCLKVADPLYEMLIELQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TARMYNKSLAVGDKSYKTPLENTFNKIDKILSKLSLLDKKYGKKLDMNKSFAELLSMYDN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LKQNAYSFNPYQVNKNYDTISNFLTDKLIIRDCYIRGKLIKDPDFADSTAITGFFGNQPH
HHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCE
IILKVGKLQSKSFELINISKQNATSNTAQSTNSTSNLNNSLNQQSASNQQNTYIHHLVMD
EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
ISSLLSSIREHIHYACLFYNESARANKFYNEIHLSANAYKRYINDTFKPIIEKILDNPES
HHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH
AYIYKEQFVSSLSKLQTLSNALSRDTIHTLEKSVNIRDAKDHEVLYVSLFVVSIGIVLSM
HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
WFVYLTIKSIDNNVSILNRVANEFKNGNLNIKAEIRYQDEIGKAIESLVDGVGTANSILQ
HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCHHHHHH
DIKSTIERMGSLDFTKNVETDAVGDFEAIKNDVNKSLDALRKLLQAITESVVKLGTSMEE
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TSATTNALALDNKNLNEQINALANSIEEISATVNSIASNMTDTKNIINKLFEIVNKGKLA
HCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE
INQTRVDADMMSELAKKAVSIVDSIVFITEQTNLLALNAAIEAARAGEAGRGFAVVADEV
EEHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHH
KKLAEKAGGFAKNVSDIISDITKGVNSTVKSILMVDDYYKDIENYTSNVQEASQSISSAI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQNATLNMLNNSMLDVRTFSDKLAAAIEELSATAKSLADVAQELKIEVTKFKF
HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNISVKTKLYILGAIVAFFGVVIGAIVFYNTHKAVAQMDQEKYCLKVADPLYEMLIELQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TARMYNKSLAVGDKSYKTPLENTFNKIDKILSKLSLLDKKYGKKLDMNKSFAELLSMYDN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LKQNAYSFNPYQVNKNYDTISNFLTDKLIIRDCYIRGKLIKDPDFADSTAITGFFGNQPH
HHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCE
IILKVGKLQSKSFELINISKQNATSNTAQSTNSTSNLNNSLNQQSASNQQNTYIHHLVMD
EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
ISSLLSSIREHIHYACLFYNESARANKFYNEIHLSANAYKRYINDTFKPIIEKILDNPES
HHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH
AYIYKEQFVSSLSKLQTLSNALSRDTIHTLEKSVNIRDAKDHEVLYVSLFVVSIGIVLSM
HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
WFVYLTIKSIDNNVSILNRVANEFKNGNLNIKAEIRYQDEIGKAIESLVDGVGTANSILQ
HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCHHHHHH
DIKSTIERMGSLDFTKNVETDAVGDFEAIKNDVNKSLDALRKLLQAITESVVKLGTSMEE
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TSATTNALALDNKNLNEQINALANSIEEISATVNSIASNMTDTKNIINKLFEIVNKGKLA
HCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE
INQTRVDADMMSELAKKAVSIVDSIVFITEQTNLLALNAAIEAARAGEAGRGFAVVADEV
EEHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHH
KKLAEKAGGFAKNVSDIISDITKGVNSTVKSILMVDDYYKDIENYTSNVQEASQSISSAI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQNATLNMLNNSMLDVRTFSDKLAAAIEELSATAKSLADVAQELKIEVTKFKF
HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]