| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is prs [H]
Identifier: 195952396
GI number: 195952396
Start: 16463
End: 17401
Strand: Direct
Name: prs [H]
Synonym: HY04AAS1_0016
Alternate gene names: 195952396
Gene position: 16463-17401 (Clockwise)
Preceding gene: 195952393
Following gene: 195952403
Centisome position: 1.06
GC content: 38.02
Gene sequence:
>939_bases ATGGGTATACCGATTAAGCTTATTGCCGGTTCGTCAAATATGAAGTTAGCTCAAGAAATATCTGAATATCTTGATATACC ATTATCAAAAACACTTCTTAGTAAATTTAGCGATGGTGAGATAAGAGTGCAGGTAGAAGAATCTATGAGAGGTGGAGATA TATTTGTTATACAATCGTTATCGGCTCCTATAAACGATCACATTATGGAGCTTGTACTACTATTAGATGCTATTAAAAGA GCGTCTGCTTATCGTATAACCGCTGTAATACCTTATTTTGCCTATGCAAGACAAGATAGAAAAGATAAACCACGTGTTCC TATAAGCGCTAGAGTGCTGGCTGATATGATTACAACAGCGGGAGCCCAAAGGGCTGTGATAATGGATTTACACTCCCCTC AAATTCAGGGCTTTTTTAATATACCAGTGGATAATCTCTTGGCTTTACCGGTGCTTTACGATTATATAAAATATAAAGTA GATTCTCCCAACACTGTTATAGTATCCCCAGATGCTGGTGGTGCTGAAAGGGCAAGGCAGCTTGCCAATAAGCTTGGGTG CAATATCGCCATCATATACAAAAGAAGACCAGAACCAAATAAAGCGGAAGTATTTGACGTTATAGGAAACGTAGAAGGCA AAGATGCCATCATAATAGATGACATTATAGATACGGCAGGTACCTTGGTGGCTGCTACCAACATGCTTATAAACAAAGGA GCAAAATCTGTTAGAGCGCTAACTACTCACGGTGTTTTATCTGGACCAGCATTAGAGCGTATAAACAACTCTATATTAGA AGAGGTAGTATTAACCAACACCATATGCCAACAAGGTAAAGAATCTAGCAAAATAAACATAGTAAGCATAGCTCCAATAG TAGGTGAAGCTATAAAGCGTATATATGAAAACTCTTCAGTGAGTTCTTTATTCGTATGA
Upstream 100 bases:
>100_bases TACTCATATAAAAGTTTATTTACAATAACTTATCTCATAATCATAGAAATTTATTTGGTTTATAATACTAAAATCCTGAA ACTTTTATAGGAGTTTAGAA
Downstream 100 bases:
>100_bases TATAATATAAAACCCTTAGGATGGGTGGCCGAGTGGTCGAAGGCGCACCGCTGGAAACGGTGTGAAGGGTGATGAGCTCT TCCGCGGGTTCGAATCCCGC
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MGIPIKLIAGSSNMKLAQEISEYLDIPLSKTLLSKFSDGEIRVQVEESMRGGDIFVIQSLSAPINDHIMELVLLLDAIKR ASAYRITAVIPYFAYARQDRKDKPRVPISARVLADMITTAGAQRAVIMDLHSPQIQGFFNIPVDNLLALPVLYDYIKYKV DSPNTVIVSPDAGGAERARQLANKLGCNIAIIYKRRPEPNKAEVFDVIGNVEGKDAIIIDDIIDTAGTLVAATNMLINKG AKSVRALTTHGVLSGPALERINNSILEEVVLTNTICQQGKESSKINIVSIAPIVGEAIKRIYENSSVSSLFV
Sequences:
>Translated_312_residues MGIPIKLIAGSSNMKLAQEISEYLDIPLSKTLLSKFSDGEIRVQVEESMRGGDIFVIQSLSAPINDHIMELVLLLDAIKR ASAYRITAVIPYFAYARQDRKDKPRVPISARVLADMITTAGAQRAVIMDLHSPQIQGFFNIPVDNLLALPVLYDYIKYKV DSPNTVIVSPDAGGAERARQLANKLGCNIAIIYKRRPEPNKAEVFDVIGNVEGKDAIIIDDIIDTAGTLVAATNMLINKG AKSVRALTTHGVLSGPALERINNSILEEVVLTNTICQQGKESSKINIVSIAPIVGEAIKRIYENSSVSSLFV >Mature_311_residues GIPIKLIAGSSNMKLAQEISEYLDIPLSKTLLSKFSDGEIRVQVEESMRGGDIFVIQSLSAPINDHIMELVLLLDAIKRA SAYRITAVIPYFAYARQDRKDKPRVPISARVLADMITTAGAQRAVIMDLHSPQIQGFFNIPVDNLLALPVLYDYIKYKVD SPNTVIVSPDAGGAERARQLANKLGCNIAIIYKRRPEPNKAEVFDVIGNVEGKDAIIIDDIIDTAGTLVAATNMLINKGA KSVRALTTHGVLSGPALERINNSILEEVVLTNTICQQGKESSKINIVSIAPIVGEAIKRIYENSSVSSLFV
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=310, Percent_Identity=47.0967741935484, Blast_Score=299, Evalue=2e-81, Organism=Homo sapiens, GI4506129, Length=310, Percent_Identity=46.4516129032258, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI28557709, Length=310, Percent_Identity=46.4516129032258, Blast_Score=293, Evalue=1e-79, Organism=Homo sapiens, GI84875539, Length=313, Percent_Identity=46.0063897763578, Blast_Score=290, Evalue=8e-79, Organism=Homo sapiens, GI4506133, Length=337, Percent_Identity=38.2789317507418, Blast_Score=195, Evalue=5e-50, Organism=Homo sapiens, GI194018537, Length=330, Percent_Identity=37.5757575757576, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI310128524, Length=144, Percent_Identity=34.0277777777778, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI310115209, Length=144, Percent_Identity=34.0277777777778, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI310118259, Length=144, Percent_Identity=34.0277777777778, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI310119946, Length=144, Percent_Identity=34.0277777777778, Blast_Score=88, Evalue=8e-18, Organism=Escherichia coli, GI1787458, Length=312, Percent_Identity=46.474358974359, Blast_Score=287, Evalue=6e-79, Organism=Caenorhabditis elegans, GI17554702, Length=310, Percent_Identity=48.7096774193548, Blast_Score=298, Evalue=2e-81, Organism=Caenorhabditis elegans, GI25149168, Length=310, Percent_Identity=48.7096774193548, Blast_Score=298, Evalue=3e-81, Organism=Caenorhabditis elegans, GI71989924, Length=310, Percent_Identity=48.7096774193548, Blast_Score=296, Evalue=8e-81, Organism=Caenorhabditis elegans, GI17554704, Length=308, Percent_Identity=48.3766233766234, Blast_Score=295, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17570245, Length=335, Percent_Identity=34.6268656716418, Blast_Score=193, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6320946, Length=309, Percent_Identity=47.2491909385113, Blast_Score=284, Evalue=1e-77, Organism=Saccharomyces cerevisiae, GI6321776, Length=310, Percent_Identity=46.1290322580645, Blast_Score=279, Evalue=4e-76, Organism=Saccharomyces cerevisiae, GI6319403, Length=310, Percent_Identity=46.4516129032258, Blast_Score=276, Evalue=4e-75, Organism=Saccharomyces cerevisiae, GI6322667, Length=192, Percent_Identity=43.2291666666667, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6324511, Length=107, Percent_Identity=42.9906542056075, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI21355239, Length=310, Percent_Identity=47.4193548387097, Blast_Score=296, Evalue=1e-80, Organism=Drosophila melanogaster, GI45551540, Length=333, Percent_Identity=44.1441441441441, Blast_Score=283, Evalue=1e-76, Organism=Drosophila melanogaster, GI24651458, Length=353, Percent_Identity=33.9943342776204, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24651456, Length=353, Percent_Identity=33.9943342776204, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI281362873, Length=353, Percent_Identity=33.9943342776204, Blast_Score=187, Evalue=7e-48, Organism=Drosophila melanogaster, GI24651454, Length=353, Percent_Identity=33.9943342776204, Blast_Score=187, Evalue=7e-48, Organism=Drosophila melanogaster, GI24651462, Length=372, Percent_Identity=32.5268817204301, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI24651464, Length=372, Percent_Identity=32.5268817204301, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI45552010, Length=201, Percent_Identity=38.3084577114428, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33970; Mature: 33839
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPIKLIAGSSNMKLAQEISEYLDIPLSKTLLSKFSDGEIRVQVEESMRGGDIFVIQSL CCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECC SAPINDHIMELVLLLDAIKRASAYRITAVIPYFAYARQDRKDKPRVPISARVLADMITTA CCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GAQRAVIMDLHSPQIQGFFNIPVDNLLALPVLYDYIKYKVDSPNTVIVSPDAGGAERARQ CCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCHHHHHH LANKLGCNIAIIYKRRPEPNKAEVFDVIGNVEGKDAIIIDDIIDTAGTLVAATNMLINKG HHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCC AKSVRALTTHGVLSGPALERINNSILEEVVLTNTICQQGKESSKINIVSIAPIVGEAIKR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH IYENSSVSSLFV HHCCCCCCCCCC >Mature Secondary Structure GIPIKLIAGSSNMKLAQEISEYLDIPLSKTLLSKFSDGEIRVQVEESMRGGDIFVIQSL CCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECC SAPINDHIMELVLLLDAIKRASAYRITAVIPYFAYARQDRKDKPRVPISARVLADMITTA CCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GAQRAVIMDLHSPQIQGFFNIPVDNLLALPVLYDYIKYKVDSPNTVIVSPDAGGAERARQ CCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCHHHHHH LANKLGCNIAIIYKRRPEPNKAEVFDVIGNVEGKDAIIIDDIIDTAGTLVAATNMLINKG HHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCC AKSVRALTTHGVLSGPALERINNSILEEVVLTNTICQQGKESSKINIVSIAPIVGEAIKR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH IYENSSVSSLFV HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]