Click here to switch to the map view.

The map label for this gene is dedA [H]

Identifier: 194738384

GI number: 194738384

Start: 2482852

End: 2483511

Strand: Reverse

Name: dedA [H]

Synonym: SeSA_A2597

Alternate gene names: 194738384

Gene position: 2483511-2482852 (Counterclockwise)

Preceding gene: 194734499

Following gene: 194734039

Centisome position: 52.74

GC content: 50.61

Gene sequence:

>660_bases
ATGGACCTGATCTACTTTATTATTGATTTTATTCTGCACATCGATGTGCATCTGGCGGAGCTGGTCGCGGAGTACGGCGT
CTGGGTGTACGCTATTTTGTTTTTGATTCTGTTTTGTGAAACCGGCCTGGTCGTCACGCCGTTTCTGCCGGGCGACTCGC
TGCTGTTTGTCGCCGGGGCGCTGGCTTCGCTGGAAACCAACGATCTCAATGTGCATGTCATGGTGGCGTTAATGCTGATC
GCCGCAATTGTTGGCGATGCGGTAAATTACACGATTGGTCGACTGTTCGGCGAAAAACTGTTCAGTAATCCGAATTCGAA
AATTTTCCGCCGCAGTTACCTGGATAAAACCCACCAGTTTTATGAAAAACACGGCGGTAAAACTATCATTCTCGCTCGCT
TCGTGCCGATCGTCAGAACCTTTGCGCCGTTTGTGGCAGGGATGGGGCACATGTCCTATCGGCATTTTGCCGCTTATAAC
GTCATCGGCGCGCTGCTGTGGGTGCTGCTCTTTACCTACGCCGGTTATTTCTTCGGTACGATACCGTTGATTCAGGATAA
CCTTAAGCTGCTGATTGTGGGGATTATCGTGGTTTCGATATTACCTGGCGTCATCGAGATTATTCGGCATAAGCGCGCTG
CGTCGCGTGCCGCAAAATAG

Upstream 100 bases:

>100_bases
CCGGTTTGACCTTCCAAAACCACCAATGGGCCCGCTATTTCTGGCGGACTAATCCGAATCGCACACCCGAAACGTGTCGG
GTAGAAAGGCAAAGACAAAT

Downstream 100 bases:

>100_bases
AAAGTAACTCAGCGGTTCGACCACTTTTTTATCCAAAGTTTCGGGCTGTTATGTTTTAATGTGCAACATTCATGGTCTGT
TGGGGGCAAAAATGGCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHVMVALMLI
AAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLLFTYAGYFFGTIPLIQDNLKLLIVGIIVVSILPGVIEIIRHKRAASRAAK

Sequences:

>Translated_219_residues
MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHVMVALMLI
AAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLLFTYAGYFFGTIPLIQDNLKLLIVGIIVVSILPGVIEIIRHKRAASRAAK
>Mature_219_residues
MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHVMVALMLI
AAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLLFTYAGYFFGTIPLIQDNLKLLIVGIIVVSILPGVIEIIRHKRAASRAAK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=97.6190476190476, Blast_Score=415, Evalue=1e-117,
Organism=Escherichia coli, GI1789481, Length=154, Percent_Identity=34.4155844155844, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1789384, Length=192, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24462; Mature: 24462

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLETNDLNVHVMVALMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGT
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPLIQDNLKLLIVGIIVVSILPGVIEIIRHKRAASRAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLETNDLNVHVMVALMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGT
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPLIQDNLKLLIVGIIVVSILPGVIEIIRHKRAASRAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]