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The map label for this gene is ydiO [H]

Identifier: 194738369

GI number: 194738369

Start: 1400672

End: 1401823

Strand: Reverse

Name: ydiO [H]

Synonym: SeSA_A1452

Alternate gene names: 194738369

Gene position: 1401823-1400672 (Counterclockwise)

Preceding gene: 194735103

Following gene: 194736515

Centisome position: 29.77

GC content: 50.0

Gene sequence:

>1152_bases
ATGGATTTTTCATTAACTGAAGAACAAGAACTATTACTGGCCAGTATTCGCGAGTTAATCACCAGCAATTTTCCGGAAGA
GTATTTCCGTACCTGCGATCAAACGGGCACCTATCCCAAAGAATTTATGCAGGCGCTGGCGGAAAACGGTATTTCGATGC
TGGGCGTCCCGGAAGAATTCGGCGGCATTCCGGCTGACTATGTAACGCAAATGCTGGCGCTGATGGAAATCTCAAAATGC
GGCGCTCCGGCCTTTTTGATTACCAACGGCCAATGCATTCACAGTATGCGCCGTTTTGGTTCCGCAGAACAACTGCGTAA
AACAGCAGAAAGCACTCTGGCCACCGGCGATCCAGCATATGCGCTCGCCTTAACAGAACCTGGCGCGGGATCTGATAATA
ATAGCGCCACAACAACCTGGACGCGTAAAAACGGCAAGGTTTATCTTAACGGCCAAAAAACGTTTATCACCGGTGCAAAA
GAATATCCTTACATGCTGGTTCTGGCGCGCGATACGGAGCCAAAAGATCCTAAAAAAGCGTTCACGCTTTGGTGGGTGGA
CTCAAATAAACCGGGCATAAAGATTAATCCGCTGCATAAAATTGGCTGGCACATGTTGAGTACATGCGAAGTTTATCTCG
ATAATGTCGAGGTTGACGAAAGCGACCGGGTCGGTGAGGAAGGCATGGGTTTCCTCAATGTCATGTACAATTTTGAGATG
GAGCGTTTGATTAATGCGGCGCGCAGTACAGGTTTCGCCGAATGCGCATTTGAAGATGCCGCCCGTTACGCCAACCAGCG
TATCGCCTTTGGTAAACCCATCGGCCATAACCAGATGATCCAGGAAAAGCTGGCGTTAATGGCCATCAAAATCGAAAACA
TGCGCAATATGGTGTTGAAAGTCGCCTGGCAGGCCGATCGGGAAGAGTCACTGCGTACCAGCGCCGCGCTGGCTAAGCTG
TACTGCGCACGCACAGCGATGGAAGTGATTGACGATGCGATTCAGATTATGGGTGGGCTTGGTTATACTGACGAAGCCCG
TGTCTCCCGCTTCTGGCGCGATGTTCGCTGCGAACGTATCGGTGGCGGCACGGATGAAATTATGATCTATGTGGCAGGAC
GCCAGATTCTGAAAGACTATCAGAACAAGTAA

Upstream 100 bases:

>100_bases
GTTATCTCACCAGATTTAAAACTGATGGACACAAGATTATTTACCGATAGCACTATGGGATTCACGCTTCCTGACGCAAC
ACATTAAAAGGAGTACAAAT

Downstream 100 bases:

>100_bases
GGATCGTACCGGAACGTCTTATTCGGCCTGACTGCTTTACGGCATCAGGCCGGATAAATCAGATAAATTTCGCCGTCAGG
TATTTGGCAGCAAATACGCC

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDFSLTEEQELLLASIRELITSNFPEEYFRTCDQTGTYPKEFMQALAENGISMLGVPEEFGGIPADYVTQMLALMEISKC
GAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLATGDPAYALALTEPGAGSDNNSATTTWTRKNGKVYLNGQKTFITGAK
EYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKINPLHKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEM
ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADREESLRTSAALAKL
YCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK

Sequences:

>Translated_383_residues
MDFSLTEEQELLLASIRELITSNFPEEYFRTCDQTGTYPKEFMQALAENGISMLGVPEEFGGIPADYVTQMLALMEISKC
GAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLATGDPAYALALTEPGAGSDNNSATTTWTRKNGKVYLNGQKTFITGAK
EYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKINPLHKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEM
ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADREESLRTSAALAKL
YCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK
>Mature_383_residues
MDFSLTEEQELLLASIRELITSNFPEEYFRTCDQTGTYPKEFMQALAENGISMLGVPEEFGGIPADYVTQMLALMEISKC
GAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLATGDPAYALALTEPGAGSDNNSATTTWTRKNGKVYLNGQKTFITGAK
EYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKINPLHKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEM
ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADREESLRTSAALAKL
YCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=383, Percent_Identity=31.5926892950392, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI4501857, Length=382, Percent_Identity=29.3193717277487, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI226958412, Length=384, Percent_Identity=28.6458333333333, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI226958414, Length=347, Percent_Identity=29.971181556196, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI4557231, Length=389, Percent_Identity=29.8200514138817, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI187960098, Length=389, Percent_Identity=29.8200514138817, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI4501859, Length=380, Percent_Identity=26.8421052631579, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI7656849, Length=355, Percent_Identity=28.7323943661972, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI21361497, Length=364, Percent_Identity=32.1428571428571, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI76496475, Length=384, Percent_Identity=33.0729166666667, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI4557235, Length=384, Percent_Identity=33.0729166666667, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI38505218, Length=314, Percent_Identity=26.7515923566879, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI48976061, Length=300, Percent_Identity=27, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI211971008, Length=300, Percent_Identity=27, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI4503943, Length=302, Percent_Identity=26.4900662251656, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI7669494, Length=276, Percent_Identity=27.536231884058, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI87081958, Length=383, Percent_Identity=95.3002610966057, Blast_Score=772, Evalue=0.0,
Organism=Escherichia coli, GI1786223, Length=382, Percent_Identity=47.6439790575916, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI87082384, Length=261, Percent_Identity=26.8199233716475, Blast_Score=75, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=386, Percent_Identity=32.9015544041451, Blast_Score=188, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17570075, Length=388, Percent_Identity=30.6701030927835, Blast_Score=150, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17534899, Length=352, Percent_Identity=30.1136363636364, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17569725, Length=354, Percent_Identity=31.3559322033898, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17505929, Length=345, Percent_Identity=29.8550724637681, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17551932, Length=381, Percent_Identity=28.3464566929134, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17508101, Length=383, Percent_Identity=26.3707571801567, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17506239, Length=384, Percent_Identity=26.5625, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI17533517, Length=352, Percent_Identity=26.9886363636364, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI71985184, Length=355, Percent_Identity=30.1408450704225, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71990804, Length=295, Percent_Identity=27.7966101694915, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=27.7056277056277, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17534353, Length=289, Percent_Identity=27.681660899654, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=271, Percent_Identity=24.3542435424354, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71985192, Length=302, Percent_Identity=29.1390728476821, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=306, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17531909, Length=247, Percent_Identity=25.5060728744939, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=310, Percent_Identity=24.8387096774194, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI86563381, Length=310, Percent_Identity=24.8387096774194, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21356377, Length=381, Percent_Identity=32.2834645669291, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24646207, Length=379, Percent_Identity=30.6068601583113, Blast_Score=174, Evalue=8e-44,
Organism=Drosophila melanogaster, GI21355753, Length=347, Percent_Identity=31.1239193083574, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24666513, Length=384, Percent_Identity=28.125, Blast_Score=147, Evalue=8e-36,
Organism=Drosophila melanogaster, GI24660351, Length=385, Percent_Identity=31.1688311688312, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI281363737, Length=343, Percent_Identity=32.9446064139942, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI19920834, Length=383, Percent_Identity=24.5430809399478, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42991; Mature: 42991

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSLTEEQELLLASIRELITSNFPEEYFRTCDQTGTYPKEFMQALAENGISMLGVPEEF
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCHHH
GGIPADYVTQMLALMEISKCGAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLATGDPAY
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCE
ALALTEPGAGSDNNSATTTWTRKNGKVYLNGQKTFITGAKEYPYMLVLARDTEPKDPKKA
EEEEECCCCCCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCEEEEEEECCCCCCCCCE
FTLWWVDSNKPGIKINPLHKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEM
EEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLK
HHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAWQADREESLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
GGGTDEIMIYVAGRQILKDYQNK
CCCCCEEEEEECCHHHHHHHCCC
>Mature Secondary Structure
MDFSLTEEQELLLASIRELITSNFPEEYFRTCDQTGTYPKEFMQALAENGISMLGVPEEF
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCHHH
GGIPADYVTQMLALMEISKCGAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLATGDPAY
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCE
ALALTEPGAGSDNNSATTTWTRKNGKVYLNGQKTFITGAKEYPYMLVLARDTEPKDPKKA
EEEEECCCCCCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCEEEEEEECCCCCCCCCE
FTLWWVDSNKPGIKINPLHKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEM
EEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLK
HHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAWQADREESLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
GGGTDEIMIYVAGRQILKDYQNK
CCCCCEEEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]