| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yhjS [H]
Identifier: 194738367
GI number: 194738367
Start: 3688649
End: 3690208
Strand: Direct
Name: yhjS [H]
Synonym: SeSA_A3817
Alternate gene names: 194738367
Gene position: 3688649-3690208 (Clockwise)
Preceding gene: 194735897
Following gene: 194737735
Centisome position: 78.33
GC content: 53.08
Gene sequence:
>1560_bases GTGGACCCCGTATTTTCTCTCGGCATCTCATCATTATGGGATGAACTGCGCCATATGCCAACCGGCGGCGTCTGGTGGGT TAACGCCGATCGCCAGCAAGATGCCATCAGCCTGGTGAATCAAACGATTGCGTCACAAACGGAGAATGCAAATGTCGCCG TCATCGGCATGGAAGGCGATCCTGGCAAAGTAATCAAATTAGATGAATCTCACGGTCCGGAGAAAATCCGCTTATTTGCC ATGCCGGATTCAGAAAAAGGGCTATACTCTTTGCCCCACGATTTGCTTTGTTCTGTTAACCCGACGCATTACTTTTTCAT TCTTATTTGTGCAAATAACACGTGGCGGAATATAACGTCAAAAAGCCTGCATAAATGGCTGGAAAAAATGAATAAATGGA CTCGTTTTCATCACTGTTCATTGTTGGTTATTAACCCTTGTAATAATAGCGATAAACAGTCCTCGTTGTTGATGGGCGAG TATCGCTCACTTTTTGGCCTCGCCAGTTTACGTTTTCAGGGCGACCAACATTTGTTCGATATTGCCTTCTGGTGTAACGA AAAAGGCGTCAGCGCCCGACAGCAGTTATTGCTGTGTCAGCAGGACGAACGCTGGACGCTATCCCATCAGGAGGAGACGG CAATTCAGCCGCGTAGCGACGAAAAACGCATTCTTAGCCACGTCGCCGTCCTTGAAGGCGCGCCGCCGCTCTCGGAACAC TGGACGCTTTTCGACAATAACGAAGCGCTATTCAACGACGCGCGCACGGCGCAGGCCGCGACAATTATTTTTTCGCTTAC ACAGAACAACCAAATCGAGCCGCTTGCTCGTCGCATTCATACTTTGCGGCGCCAGCGGGGAAGCGCGCTGAAAATTGTCG TGCGCGAAAATATCGCCAGTTTGCGCGCCACCGATGAGCGCCTGCTGCTGGGCTGCGGCGCGAATATGATCATTCCCTGG AACGCCCCGCTTTCACGCTGCCTGACGCTTATTGAAAGCGTGCAGGGGCAGCAGTTCAGCCGTTACGTACCGGAAGACAT CACCACGCTACTGTCGATGACGCAGCCGTTGAAACTGCGCGGTTTTCAGCCGTGGGATACCTTCTGCGATGCCATCCATA CGATGATGAGCAACACCCTGCTCCCCGCCGACGGGAAAGGCGTTCTGGTCGCGCTGCGCCCGGTGCCGGGCATTCGGGTT GAGCAGGCGTTAACATTATGTCGGCCAAACCGAACCGGCGATATTATGACCATCGGCGGCAACCGTCTGGTGCTGTTTTT ATCATTCTGCCGGGTCAACGATCTGGATACCGCGTTAAACCATATTTTCCCTTTGCCGACGGGCGATATTTTCTCTAATC GTATGGTCTGGTTCGAAGATAAACAAATCAGCGCCGAGCTGGTGCAGATGCGCTTATTGTCGCCGGAACTGTGGGGAACG CCGCTACCGCTGGCAAAACGCGCCGACCCGGTAATAAATGCCGAACACGATGGCCGCATCTGGCGTCGTATTCCTGAACC CCTGCGATTGCTCGACGACACCGCGGAGCGTGCATCATGA
Upstream 100 bases:
>100_bases ACATGCTAAATCTGATGCGTTTTAATTTCAATGTTAGGTTTATTTCTGTGCTTTCGCTAGTAAACTGATAAACAGTTAAA ATAGTGACATGAGGGACACT
Downstream 100 bases:
>100_bases TGACCATCAGCGATATCGTGCAAATTATTCTTTTTTGCGCGCTGATTTTCTTTCCGCTGGGGTATCTGGCGCGTCATTCG CTACGCCGTATCAGTGATAC
Product: putative cellulose biosynthesis protein BcsE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKIRLFA MPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITSKSLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSLLMGE YRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPPLSEH WTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANMIIPW NAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVPGIRV EQALTLCRPNRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPELWGT PLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS
Sequences:
>Translated_519_residues MDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKIRLFA MPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITSKSLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSLLMGE YRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPPLSEH WTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANMIIPW NAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVPGIRV EQALTLCRPNRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPELWGT PLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS >Mature_519_residues MDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKIRLFA MPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITSKSLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSLLMGE YRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPPLSEH WTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANMIIPW NAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVPGIRV EQALTLCRPNRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPELWGT PLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789958, Length=519, Percent_Identity=79.7687861271676, Blast_Score=874, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017745 [H]
Pfam domain/function: PF10995 DUF2819 [H]
EC number: NA
Molecular weight: Translated: 58805; Mature: 58805
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGD CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC PGKVIKLDESHGPEKIRLFAMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITS CCCEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCEEEEEEEECCCCCCCCHH KSLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSLLMGEYRSLFGLASLRFQGDQHLFD HHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEE IAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPPLSEH EEEEECCCCCCHHHHHHEECCCCCEECCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC WTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIAS EEEEECCHHHHCCCHHHEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHH LRATDERLLLGCGANMIIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLR HHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHC GFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGG CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECC NRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPELWGT CEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHCCHHHCCC PLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS CCCCHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGD CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC PGKVIKLDESHGPEKIRLFAMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITS CCCEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCEEEEEEEECCCCCCCCHH KSLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSLLMGEYRSLFGLASLRFQGDQHLFD HHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEE IAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPPLSEH EEEEECCCCCCHHHHHHEECCCCCEECCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC WTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIAS EEEEECCHHHHCCCHHHEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHH LRATDERLLLGCGANMIIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLR HHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHC GFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGG CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECC NRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPELWGT CEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHCCHHHCCC PLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS CCCCHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]