| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yhiN [H]
Identifier: 194738325
GI number: 194738325
Start: 3641037
End: 3642233
Strand: Reverse
Name: yhiN [H]
Synonym: SeSA_A3781
Alternate gene names: 194738325
Gene position: 3642233-3641037 (Counterclockwise)
Preceding gene: 194734487
Following gene: 194737089
Centisome position: 77.34
GC content: 57.14
Gene sequence:
>1197_bases GTGGAAAGGTTTGATGCCGTTATTATAGGCGCTGGCGCAGCGGGCATGTTTTGCGCCGCGCAGGCAGGACAGGCGGGTAG CCGCGTGCTGCTCGTCGATAATGGCAAGAAGCCAGGACGTAAAATCCTCATGTCCGGCGGTGGCCGCTGCAACTTTACTA ATCTTTATGTTGAGCCTGCTGCGTATTTGAGCCAGAACCCCCATTTTTGCAAATCAGCATTAGCCCGCTATACCCAGTGG GACTTTATCGATCTGGTCGGCAGGTATGGGATAGCCTGGCATGAGAAAACGCTGGGACAGCTTTTTTGCGATGATTCCGC CCAACGCATTGTCGATATGCTGGTTGCCGAGTGCGACAAAGGCGGCGTAACGATGCGCCTGCGTAGCGAGGTACTGAGCG TCGAGCGTGATGAGTCGGGTTTCATACTGGCGCTGAACGGCGAGACGGTGACTACGCAAAAGCTGGTGATTGCCAGCGGC GGCCTGTCGATGCCGGGGCTTGGCGCATCGCCGTTTGGCTATAAAATCGCCGAACAGTTTGGTCTCAAGGTGTTGCCGAC GCGCGCCGGGCTGGTGCCCTTTACGCTGCATAAGCCGCTGTTAGAACAGCTCCAGACGCTGTCTGGCGTCTCTGTGCCCT GCGTGATTACCGCCCGCAATGGCACGGTATTTCGGGAAAACCTACTTTTTACCCATCGTGGGCTGTCCGGCCCCGCTGTT TTACAGATTTCCAGCTACTGGCAACCGGGCGAGTTAGTGAGCATTAACTTATTGCCGGACCTCTCGCTGGAAGACGTTCT CAATGAACAGCGTAACGCGCACCCGAACCAGAGTCTGAAGAACACGCTGGCGATGCATTTGCCGAAACGGTTGGTGGAGT GTTTACAACAGTTGGGGCACATCCCGGATGTATCGCTCAGGCAGTTGAACGTTCGTGACCAGCAGGCGTTAGTTGACACG CTTACGGCCTGGCAAGTGCAGCCTAACGGCACCGAAGGCTATCGGACAGCGGAAGTGACGCTGGGCGGCGTGGATACAAA CGAACTATCATCGCGGACTATGGAAGCGCGCCGCGTGCCGGGTCTCTATTTTATCGGCGAAGTGATGGACGTCACCGGCT GGTTGGGCGGCTATAACTTCCAGTGGGCGTGGTCGAGCGCCTGGGCCTGCGCGCAGGATTTGGCGGCAAAACGCTAA
Upstream 100 bases:
>100_bases ATATATTTCAGATAAATACCATTTTCAGGCGCTTTTCGCGCTGGTGCGACCACTGAGGAAACTTTACAATTCCCGCCCGA ATTTGAGAGAGGAAGGCGAC
Downstream 100 bases:
>100_bases GTACCATTACAAACAATAAGCGAATAGACATCCCGGACAGAGGTGTTAGTATCGATTTATAGCAGTTATGAGTATGCGTG TTTCATTTACGGCCAGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLVDNGKKPGRKILMSGGGRCNFTNLYVEPAAYLSQNPHFCKSALARYTQW DFIDLVGRYGIAWHEKTLGQLFCDDSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFILALNGETVTTQKLVIASG GLSMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITARNGTVFRENLLFTHRGLSGPAV LQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPNQSLKNTLAMHLPKRLVECLQQLGHIPDVSLRQLNVRDQQALVDT LTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLAAKR
Sequences:
>Translated_398_residues MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLVDNGKKPGRKILMSGGGRCNFTNLYVEPAAYLSQNPHFCKSALARYTQW DFIDLVGRYGIAWHEKTLGQLFCDDSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFILALNGETVTTQKLVIASG GLSMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITARNGTVFRENLLFTHRGLSGPAV LQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPNQSLKNTLAMHLPKRLVECLQQLGHIPDVSLRQLNVRDQQALVDT LTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLAAKR >Mature_398_residues MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLVDNGKKPGRKILMSGGGRCNFTNLYVEPAAYLSQNPHFCKSALARYTQW DFIDLVGRYGIAWHEKTLGQLFCDDSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFILALNGETVTTQKLVIASG GLSMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITARNGTVFRENLLFTHRGLSGPAV LQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPNQSLKNTLAMHLPKRLVECLQQLGHIPDVSLRQLNVRDQQALVDT LTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLAAKR
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=398, Percent_Identity=87.6884422110553, Blast_Score=710, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43495; Mature: 43495
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLVDNGKKPGRKILMSGGGRCNFTNLYVEPA CCCCCEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCH AYLSQNPHFCKSALARYTQWDFIDLVGRYGIAWHEKTLGQLFCDDSAQRIVDMLVAECDK HHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GGVTMRLRSEVLSVERDESGFILALNGETVTTQKLVIASGGLSMPGLGASPFGYKIAEQF CCEEEEEEHHHHHCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHC GLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITARNGTVFRENLLFTHRGLSGPAV CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEECCCCCCEE LQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPNQSLKNTLAMHLPKRLVECLQQLGH EEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDVSLRQLNVRDQQALVDTLTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVP CCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLAAKR CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCC >Mature Secondary Structure MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLVDNGKKPGRKILMSGGGRCNFTNLYVEPA CCCCCEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCH AYLSQNPHFCKSALARYTQWDFIDLVGRYGIAWHEKTLGQLFCDDSAQRIVDMLVAECDK HHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GGVTMRLRSEVLSVERDESGFILALNGETVTTQKLVIASGGLSMPGLGASPFGYKIAEQF CCEEEEEEHHHHHCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHC GLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITARNGTVFRENLLFTHRGLSGPAV CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEECCCCCCEE LQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPNQSLKNTLAMHLPKRLVECLQQLGH EEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDVSLRQLNVRDQQALVDTLTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVP CCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLAAKR CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]