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The map label for this gene is yibP [H]

Identifier: 194738321

GI number: 194738321

Start: 3774673

End: 3775956

Strand: Direct

Name: yibP [H]

Synonym: SeSA_A3904

Alternate gene names: 194738321

Gene position: 3774673-3775956 (Clockwise)

Preceding gene: 194733987

Following gene: 194735049

Centisome position: 80.16

GC content: 59.03

Gene sequence:

>1284_bases
ATGAGGGGAAAGGCGATTAACACCATTCAACAGGCCGTGAAACCAAGAACGTTTTCAGTCAGGCCTTTGTTCTACGCCAG
CGTACTTAGCGCTGGCGTATTGTTGTGCGCCTTTTCCGCCCACGCGGATGACCGTGATCAACTCAAATCTATTCAGGCCG
ATATCGCCGCGAAAGAACGCGACGTACGCCAGCAGCAGCAACAGCGCGCCAGCCTCCTGGCACAACTGAAAGCCCAGGAA
GAGGCCATCTCGGCCGCAGCGCGTAAGCTGCGCGAAACGCAAAGCACTCTGGATCAGTTAAACGCGCAAATTGATGAGAT
GAACGCCTCAATTGCCAAACTGGAGCAGCAAAAAGCCAGCCAGGAGCGTAATCTCGCCGCGCAGTTGGACGCCGCTTTCC
GCCAGGGCGAACACACCGGCATTCAGCTTATTCTTAGCGGAGAAGAAAGCCAGCGTGGGCAACGCCTGCAGGCCTACTTC
GGCTATCTGAACCAGGCGCGCCAGGAGACTATCGCCGAACTGAAACAGACTCGCGAACAGGTCGCCACGCAAAAAGCCGA
GCTGGAAGAGAAGCAAAGCCAACAACAAACGTTGCTGTATGAACAGCGCGCCCAGCAGGCGAAGCTGGAGCAGGCGCGTA
ATGAACGTAAGAAAACGCTTGCCGGACTGGAGTCGTCTATTCAGCAAGGCCAGCAACAGTTAAGCGAACTACGCGCCAAC
GAATCACGCCTACGCAACAGTATCGCGCGGGCAGAAGCGGCGGCCAAAGCGCGAGCGGAGCGTGAAGCCCGCGAAGCGCA
GGCGGTACGCGATAAGCAGCAGGAAGCCTCGCGTAAAGGCAGCACCTATAAGCCGACGGAAAGCGAGCGTTCGCTAATGT
CCCGCACCGGCGGTCTGGGCGCGCCTCGCGGTCAGGCATACTGGCCGGTACGCGGCCCGATATTGCATCGCTATGGCGAA
CGGCTGCAAGGTGAGCTACGTTGGAAGGGGATGGTGATCGGCGCGTCGGAAGGCACCGAGGTCAAAGCCATCGCCGACGG
CAGGGTGATTCTGGCGGACTGGCTGCAAGGCTATGGCCTGGTGGTGGTCGTGGAGCATGGTAAAGGCGATATGAGCCTTT
ACGGCTATAACCAGAGCGCGCTGGTCAGCGTAGGCGCGCAGGTGCGCGCCGGACAACCTATCGCCCTTGTGGGCAGTAGC
GGCGGTCAGGGCAGACCCTCGCTTTATTTCGAAATTCGTCGCCAGGGTCAGGCCGTCAATCCACAGCCGTGGTTGGGAAA
ATAA

Upstream 100 bases:

>100_bases
ACTTTCAGACATTGCGCCTACCATGCTGTCGCTGATGGGGATGGAAATCCCGCAAGAGATGACTGGTAAGCCGCTGTTCA
TCGTGGAATAATCCCTCCCC

Downstream 100 bases:

>100_bases
GTTTTGCCTCAGTTTCGTCGCTCCATTCTCACGCTGGCCACTTTGCTGGCGTTTGCACATCCCGTTTTCGCTGGCAAGCT
CGCCATCGTGATTGATGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKERDVRQQQQQRASLLAQLKAQE
EAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKASQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
GYLNQARQETIAELKQTREQVATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLGAPRGQAYWPVRGPILHRYGE
RLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSS
GGQGRPSLYFEIRRQGQAVNPQPWLGK

Sequences:

>Translated_427_residues
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKERDVRQQQQQRASLLAQLKAQE
EAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKASQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
GYLNQARQETIAELKQTREQVATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLGAPRGQAYWPVRGPILHRYGE
RLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSS
GGQGRPSLYFEIRRQGQAVNPQPWLGK
>Mature_427_residues
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKERDVRQQQQQRASLLAQLKAQE
EAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKASQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
GYLNQARQETIAELKQTREQVATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLGAPRGQAYWPVRGPILHRYGE
RLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSS
GGQGRPSLYFEIRRQGQAVNPQPWLGK

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=419, Percent_Identity=91.4081145584725, Blast_Score=731, Evalue=0.0,
Organism=Escherichia coli, GI1789099, Length=115, Percent_Identity=39.1304347826087, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87082174, Length=119, Percent_Identity=32.7731092436975, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 47270; Mature: 47270

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKER
CCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DVRQQQQQRASLLAQLKAQEEAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAELKQTREQ
HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
APRGQAYWPVRGPILHRYGERLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGL
CCCCCEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCEEHHHHHHCCCE
VVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVN
EEEEECCCCCEEEECCCCHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
PQPWLGK
CCCCCCC
>Mature Secondary Structure
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKER
CCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DVRQQQQQRASLLAQLKAQEEAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAELKQTREQ
HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
APRGQAYWPVRGPILHRYGERLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGL
CCCCCEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCEEHHHHHHCCCE
VVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVN
EEEEECCCCCEEEECCCCHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
PQPWLGK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]