Click here to switch to the map view.

The map label for this gene is 194738303

Identifier: 194738303

GI number: 194738303

Start: 170747

End: 171697

Strand: Reverse

Name: 194738303

Synonym: SeSA_A0165

Alternate gene names: NA

Gene position: 171697-170747 (Counterclockwise)

Preceding gene: 194735199

Following gene: 194735829

Centisome position: 3.65

GC content: 53.42

Gene sequence:

>951_bases
ATGGCAAACTGGCCAAACCCGTTTATTGAACAACGTGCCGATCCGTTTATTTTACGCGACGGCAGCGATTACTACTTTAT
TGCCTCCGTACCGGAATATGACAGGCTGGAAATCCGCCGGGCTAATTCGCTGGAAGGGTTGCGCGCCGCCGACCCCGTTG
TCGTCTGGCGCAAACCGAAAACAGGCCCGATGAGCCAACTCATCTGGGCACCGGAAATGCACCGCATCAACGGTAAGTGG
TACATCTATTTTGCCGCTACCCATACTCAAGCGCTTGATAAACTGGGAATGTTCCAGCACCGCATGTTTGCCCTGGAGTG
CGCCGATGCCGACCCACTCACCGGCAAGTGGACGGAGAAAGGTCAAATTAAGACGCCGTTTGATACCTTCGCCCTCGATG
CCACCACTTTTTATCATCAGGGAAAGCAGTGGTATCTGTGGGCGCAAAAAGCGCCGGATATTGCCGGTAACTCAAATATT
TATCTGGCTGAACTGGAAAATCCGTGGACGATTAAAGGCGAGCCGGTAAGACTCAGTAAGCCAGAGTACGACTGGGAGTG
TCGGGGTTTTTGGGTTAACGAAGGTCCGGCCGTCGTGGTGCATGGCGACAAGCTGTTTATCAGCTATTCGGCCAGCGCCA
CCGATGAAAACTACTGTATGGGGTTACTGTGGATTAACGTAAACGACGATCCGCGCGATCCGGCCAACTGGCATAAATCA
CCGCGCCCGGTCTTTACCACCAGCTATGAAAATCGCCAGTATGGGCCGGGACACAACAGCTTTACGCAAACGCCGGAAGG
TGAAGATGTACTGGTGTACCACGCGAGAAATTACACCGAAATTGAAGGCGATCCGTTGTACGATCCCAACCGCCATACGC
GTCTGAAACGGGTGCGCTGGGACGAAAACGGGATGCCTGATTTTGGCGTACCGCCAGCCGATACGATCTAA

Upstream 100 bases:

>100_bases
TGAAAAAAATCCAGGACGATTTGGAAAAACGTCGCACTAATTACCGCGAATTGAGTGAGTTGCAGGAGCTCAAAGCCGCT
GAAAGCGTAAGGAAAGCCTG

Downstream 100 bases:

>100_bases
GCCGTTGCACTGCCCGGTGGCGCTAACGCTTACCGGGCCTACAGATTTTTCCATTGTAGGCAGCATAAGCGTTAGCGCCA
TCGGCACAACGCTATACTAA

Product: alpha-N-arabinofuranosidase 2

Products: NA

Alternate protein names: Alpha-N-arabinofuranosidase II; Alpha-N-AFase II; Arabinosidase II [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MANWPNPFIEQRADPFILRDGSDYYFIASVPEYDRLEIRRANSLEGLRAADPVVVWRKPKTGPMSQLIWAPEMHRINGKW
YIYFAATHTQALDKLGMFQHRMFALECADADPLTGKWTEKGQIKTPFDTFALDATTFYHQGKQWYLWAQKAPDIAGNSNI
YLAELENPWTIKGEPVRLSKPEYDWECRGFWVNEGPAVVVHGDKLFISYSASATDENYCMGLLWINVNDDPRDPANWHKS
PRPVFTTSYENRQYGPGHNSFTQTPEGEDVLVYHARNYTEIEGDPLYDPNRHTRLKRVRWDENGMPDFGVPPADTI

Sequences:

>Translated_316_residues
MANWPNPFIEQRADPFILRDGSDYYFIASVPEYDRLEIRRANSLEGLRAADPVVVWRKPKTGPMSQLIWAPEMHRINGKW
YIYFAATHTQALDKLGMFQHRMFALECADADPLTGKWTEKGQIKTPFDTFALDATTFYHQGKQWYLWAQKAPDIAGNSNI
YLAELENPWTIKGEPVRLSKPEYDWECRGFWVNEGPAVVVHGDKLFISYSASATDENYCMGLLWINVNDDPRDPANWHKS
PRPVFTTSYENRQYGPGHNSFTQTPEGEDVLVYHARNYTEIEGDPLYDPNRHTRLKRVRWDENGMPDFGVPPADTI
>Mature_315_residues
ANWPNPFIEQRADPFILRDGSDYYFIASVPEYDRLEIRRANSLEGLRAADPVVVWRKPKTGPMSQLIWAPEMHRINGKWY
IYFAATHTQALDKLGMFQHRMFALECADADPLTGKWTEKGQIKTPFDTFALDATTFYHQGKQWYLWAQKAPDIAGNSNIY
LAELENPWTIKGEPVRLSKPEYDWECRGFWVNEGPAVVVHGDKLFISYSASATDENYCMGLLWINVNDDPRDPANWHKSP
RPVFTTSYENRQYGPGHNSFTQTPEGEDVLVYHARNYTEIEGDPLYDPNRHTRLKRVRWDENGMPDFGVPPADTI

Specific function: Unknown

COG id: COG3940

COG function: function code R; Predicted beta-xylosidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016828
- InterPro:   IPR006710
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 36540; Mature: 36409

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANWPNPFIEQRADPFILRDGSDYYFIASVPEYDRLEIRRANSLEGLRAADPVVVWRKPK
CCCCCCHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCC
TGPMSQLIWAPEMHRINGKWYIYFAATHTQALDKLGMFQHRMFALECADADPLTGKWTEK
CCCHHHEEECCCCEEECCEEEEEEEECCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC
GQIKTPFDTFALDATTFYHQGKQWYLWAQKAPDIAGNSNIYLAELENPWTIKGEPVRLSK
CEEECCHHHEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCEEECCCCEECCC
PEYDWECRGFWVNEGPAVVVHGDKLFISYSASATDENYCMGLLWINVNDDPRDPANWHKS
CCCCCEEEEEEECCCCEEEEECCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCHHHCCC
PRPVFTTSYENRQYGPGHNSFTQTPEGEDVLVYHARNYTEIEGDPLYDPNRHTRLKRVRW
CCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEEEE
DENGMPDFGVPPADTI
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANWPNPFIEQRADPFILRDGSDYYFIASVPEYDRLEIRRANSLEGLRAADPVVVWRKPK
CCCCCHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCC
TGPMSQLIWAPEMHRINGKWYIYFAATHTQALDKLGMFQHRMFALECADADPLTGKWTEK
CCCHHHEEECCCCEEECCEEEEEEEECCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC
GQIKTPFDTFALDATTFYHQGKQWYLWAQKAPDIAGNSNIYLAELENPWTIKGEPVRLSK
CEEECCHHHEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCEEECCCCEECCC
PEYDWECRGFWVNEGPAVVVHGDKLFISYSASATDENYCMGLLWINVNDDPRDPANWHKS
CCCCCEEEEEEECCCCEEEEECCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCHHHCCC
PRPVFTTSYENRQYGPGHNSFTQTPEGEDVLVYHARNYTEIEGDPLYDPNRHTRLKRVRW
CCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEEEE
DENGMPDFGVPPADTI
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10657233 [H]