| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is lst [H]
Identifier: 194738265
GI number: 194738265
Start: 3791056
End: 3791979
Strand: Reverse
Name: lst [H]
Synonym: SeSA_A3919
Alternate gene names: 194738265
Gene position: 3791979-3791056 (Counterclockwise)
Preceding gene: 194736857
Following gene: 194737924
Centisome position: 80.52
GC content: 32.03
Gene sequence:
>924_bases ATGACTAATTTGCAATTATTGATTGCACGGTCAATTATAGAAAAAGAGCAGTTGAAAAAAGTTGATGTTTTATTTATTGG CGATGTAGATAACGTAAAAAATCAGTACTATTTAAAAAAAATTCAGCCGTTATGTCGGCACTCAGACATCGTCCCGCAGG TAGCAAAATTTTCGACATTTAAAACGATTCAAAGAACACGGTATGCTAAAAAAATCATGGAAAAGTATGCCAGAGAATAT CATACTGTTTTCTTCGCGAATTTTCATGTCCCGCTTATACACCATATTTTATCCTGTATCACTTTTTCTGAAATAAAAAC CTTTGATGATGGTACAAATAATATCAATCAGAAAAGTATAATGTATGAAAATAAGAATATAAGCGCCACATCGAAGTTAA TACGAAAGCTGATGGGGCGTAAATATCATAAAGATGAAATATTAAAGTTAGACGCAAAACATTATACTCTATTTCCTAAT AGAACCAACATAATTGAAAAGACCGAAGGAATTATATTGGTACACCATAACGGTCTTCCTGATACGAATAATGGCTTTAA AAAAGTATTATTGGGAACTGTATATACTGATGCGTTAAAAAATAAAGAAGATGAGTGTGTTTTTCTTCAGCATCTTCAGC GGTTTATTAAAAAAGAAGCGGTTGATATATATATTCCTCACCCTCGATATGACTCTCATCAGTTTAATGGTGTATTGAAT GTTAGCTCTGAAATGATAGCCGAGGACATTATTTTAGAATATCTGGAGCAAGGGATGTCATTAGAGATATATGGATTTAA TAGCACAGTTCAGTATAACCTAAATAATATCTCAACTATCAAAAACTATAAAATAACCAGCCCTTTTCTAAAAGATAGCT TTAATCATGGACTGGGGTTCGATTTTAATCAGGTCTCAGTATAA
Upstream 100 bases:
>100_bases TAAAGCCGCTCGAATTAAAGAAAGAACAATAAGAAAAAATCTTTAATATAAAATTTATATATTTAAATAGCTTAGAGGCT ATATGTTTCTATTCATATGC
Downstream 100 bases:
>100_bases ATATAGTGTTGATTGGGTTTGTTCTTACAGAATTTTAAAAGTGAAGGAAGCCGAATAACATGAGTGTCAGCAAATGGTGA CTTCATTGAAAATAGCATTT
Product: UDP-glucose:glucosyl LPS a1,2-glucosyltransferase
Products: NA
Alternate protein names: Alpha 2,3-ST; Beta-galactoside alpha-2,3-sialyltransferase; Lipooligosaccharide sialyltransferase [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTNLQLLIARSIIEKEQLKKVDVLFIGDVDNVKNQYYLKKIQPLCRHSDIVPQVAKFSTFKTIQRTRYAKKIMEKYAREY HTVFFANFHVPLIHHILSCITFSEIKTFDDGTNNINQKSIMYENKNISATSKLIRKLMGRKYHKDEILKLDAKHYTLFPN RTNIIEKTEGIILVHHNGLPDTNNGFKKVLLGTVYTDALKNKEDECVFLQHLQRFIKKEAVDIYIPHPRYDSHQFNGVLN VSSEMIAEDIILEYLEQGMSLEIYGFNSTVQYNLNNISTIKNYKITSPFLKDSFNHGLGFDFNQVSV
Sequences:
>Translated_307_residues MTNLQLLIARSIIEKEQLKKVDVLFIGDVDNVKNQYYLKKIQPLCRHSDIVPQVAKFSTFKTIQRTRYAKKIMEKYAREY HTVFFANFHVPLIHHILSCITFSEIKTFDDGTNNINQKSIMYENKNISATSKLIRKLMGRKYHKDEILKLDAKHYTLFPN RTNIIEKTEGIILVHHNGLPDTNNGFKKVLLGTVYTDALKNKEDECVFLQHLQRFIKKEAVDIYIPHPRYDSHQFNGVLN VSSEMIAEDIILEYLEQGMSLEIYGFNSTVQYNLNNISTIKNYKITSPFLKDSFNHGLGFDFNQVSV >Mature_306_residues TNLQLLIARSIIEKEQLKKVDVLFIGDVDNVKNQYYLKKIQPLCRHSDIVPQVAKFSTFKTIQRTRYAKKIMEKYAREYH TVFFANFHVPLIHHILSCITFSEIKTFDDGTNNINQKSIMYENKNISATSKLIRKLMGRKYHKDEILKLDAKHYTLFPNR TNIIEKTEGIILVHHNGLPDTNNGFKKVLLGTVYTDALKNKEDECVFLQHLQRFIKKEAVDIYIPHPRYDSHQFNGVLNV SSEMIAEDIILEYLEQGMSLEIYGFNSTVQYNLNNISTIKNYKITSPFLKDSFNHGLGFDFNQVSV
Specific function: Transfers sialic acid from the substrate CMP-sialic acid donor to the terminal beta-D-galactosyl-1,4-acetyl-beta-D- glucosamine on the lacto-N-neotetraose branch of the lipooligosaccharide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 52 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012477 [H]
Pfam domain/function: PF07922 Glyco_transf_52 [H]
EC number: NA
Molecular weight: Translated: 35776; Mature: 35645
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLQLLIARSIIEKEQLKKVDVLFIGDVDNVKNQYYLKKIQPLCRHSDIVPQVAKFSTF CCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KTIQRTRYAKKIMEKYAREYHTVFFANFHVPLIHHILSCITFSEIKTFDDGTNNINQKSI HHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE MYENKNISATSKLIRKLMGRKYHKDEILKLDAKHYTLFPNRTNIIEKTEGIILVHHNGLP EEECCCCHHHHHHHHHHHCCCCCCCHHEEECCCEEEECCCCCCCCCCCCCEEEEECCCCC DTNNGFKKVLLGTVYTDALKNKEDECVFLQHLQRFIKKEAVDIYIPHPRYDSHQFNGVLN CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEE VSSEMIAEDIILEYLEQGMSLEIYGFNSTVQYNLNNISTIKNYKITSPFLKDSFNHGLGF CHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEEEECCCCCCCCHHHHCCCCCCCC DFNQVSV CCCCCCC >Mature Secondary Structure TNLQLLIARSIIEKEQLKKVDVLFIGDVDNVKNQYYLKKIQPLCRHSDIVPQVAKFSTF CCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KTIQRTRYAKKIMEKYAREYHTVFFANFHVPLIHHILSCITFSEIKTFDDGTNNINQKSI HHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE MYENKNISATSKLIRKLMGRKYHKDEILKLDAKHYTLFPNRTNIIEKTEGIILVHHNGLP EEECCCCHHHHHHHHHHHCCCCCCCHHEEECCCEEEECCCCCCCCCCCCCEEEEECCCCC DTNNGFKKVLLGTVYTDALKNKEDECVFLQHLQRFIKKEAVDIYIPHPRYDSHQFNGVLN CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEE VSSEMIAEDIILEYLEQGMSLEIYGFNSTVQYNLNNISTIKNYKITSPFLKDSFNHGLGF CHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEEEECCCCCCCCHHHHCCCCCCCC DFNQVSV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]