Click here to switch to the map view.

The map label for this gene is bepC [H]

Identifier: 194738230

GI number: 194738230

Start: 2791719

End: 2793128

Strand: Direct

Name: bepC [H]

Synonym: SeSA_A2887

Alternate gene names: 194738230

Gene position: 2791719-2793128 (Clockwise)

Preceding gene: 194737591

Following gene: 194735340

Centisome position: 59.28

GC content: 56.95

Gene sequence:

>1410_bases
ATGGGAAGAGTCGCGCCTGTCGCCATCGTACTGGCATTTGCTTTGTTTCATCACCAGCCCCGGGGCGCAGAAGCGCCGCC
AATGATTACATCCGAAGGATTAGCAACGGACCAGATGCTTCCTTCGCTGGATGGCTCCGCCGCTGAGTTGCCGCTCAGCG
CCGCCGCGCCGGGCAACCTGACGCTCAATGACGCGGTCAATCGCGCCGTTAGCTGGCATCCTTCTATTCGCGAAGCCGTC
GGCAAACTGCTCGCACAGAATGAACAAATAGAGGTCGCCAAATCGAAATATTATCCGCAAGTCAGCGCTGGTGTGAACAA
TGGGTACAGCAATACCTACACCGATCACGGGTATAGTCCCTCGCTGGTGCTGTCGGTATCGCAAATGCTTTATGACTTCG
GCAAAGTGGCAAGCCAGGTTCGCGCCGAAACCGCAGGCGCAGCGCAGCAACAGGCCAATGTGTTGCTCAGTATTGATACC
GTCGCGCACGAAACCGCCAACGCCATTGTACAAACGCAGAGCTGGCAGCAAATGGTAGAAGCGGCGGAAGAACAGCTCGT
CGCGCTGGACAGCATCGGTAAACTTATCCGGCAGCGCAGCGATGAAGGCGCTACGTCGCTATCTGACGTAGTGCAAACCG
AAGCCAGAATCGAATCCGCCCGCTCGCAACTGGCGCAGTATCAGGCCAATCTCGGCAGTGCGAAAGCCTCACTGATGAGC
TGGCTGGGCTGGAATTCGCTTAACGGCATCAATAATGACTTCCCGGCGAAACTTGCTCGCAGCTGTGAGACGGCAACTCC
CGACGATCGACTGGTGCCCGCGGTACTGGCCGCCTGGGCGCAGGCCAACGTTGCGCGGGCGAATCTGGACTATGCCAGCG
CGCAAATGACGCCGACAATTTCGCTCGAACCTTCCGTTCAACATTATCTTAATGATAAATATCCCAGTCATGAAGTGCTG
GATAAAACCCAGTATTCCACCTGGGTGAAAGTTGAGATGCCGCTTTATCAGGGCGGAGGGCTGACTGCCCGACGCAACGC
CGCCAGCCATGCGGTAGACGCGGCTCAGTCGACCATTCAGCGCACCCGGCTTGATGTCCGCCAGAAACTGATGGAGGCGC
GCAGCCAGGCAATGAGTCTTGCCAGCGCGTTACAAATCCTTCGTCGGCAACAGCAGCTTAGCGAACGCACGCGCGAACTG
TATCAGCAGCAATACCTTGACCTCGGTTCCCGCCCGCTGCTCGACGTGCTTAATGCGGAGCAGGAAGTTTACCAGGCGCG
TTTTGCCGAACTGCAAACGGAAAGCCAGTTGCATCAGTTGCAACTGAACTGTCTGTATAACACCGGCGCGCTTCGTCAGG
CGTTCGCGTTAAATCATCGCAGCATTCAATCCGTGGAGATCCAGCCATGA

Upstream 100 bases:

>100_bases
CTTTTGCAAAACAACCACCTGATAACCGGCGGTTGATAAAAAAGCCCCGAACGCCACGACGTTCGGGGCAACAAGCGGTG
ATATTTAAAAGGGATAAACT

Downstream 100 bases:

>100_bases
CCCGCGCCGCCCCCGATGTAGAAGAGGTACTCAGTGAGCGCGCGCTAAGCCAATGGGCGCAGGCCATCAGCTATGTCGCC
GGTCATTATCGCGTTGCCTG

Product: type I secretion outer membrane protein, TolC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVSWHPSIREAV
GKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDT
VAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLGSAKASLMS
WLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVL
DKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTREL
YQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP

Sequences:

>Translated_469_residues
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVSWHPSIREAV
GKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDT
VAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLGSAKASLMS
WLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVL
DKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTREL
YQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
>Mature_468_residues
GRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVSWHPSIREAVG
KLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTV
AHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLGSAKASLMSW
LGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLD
KTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELY
QQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51323; Mature: 51192

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCCC
TLNDAVNRAVSWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSP
CHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCH
SLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLGSAKASLMS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
WLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTI
HHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEE
SLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQ
ECCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEECEECCCCCCCCCCHHHHHHHHHHHHHH
RTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCC
>Mature Secondary Structure 
GRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCCC
TLNDAVNRAVSWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSP
CHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCH
SLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLGSAKASLMS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
WLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTI
HHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEE
SLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQ
ECCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEECEECCCCCCCCCCHHHHHHHHHHHHHH
RTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]