| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yidJ [C]
Identifier: 194738182
GI number: 194738182
Start: 1009367
End: 1010854
Strand: Direct
Name: yidJ [C]
Synonym: SeSA_A1039
Alternate gene names: 194738182
Gene position: 1009367-1010854 (Clockwise)
Preceding gene: 194734597
Following gene: 194737439
Centisome position: 21.43
GC content: 51.55
Gene sequence:
>1488_bases ATGAAAGCGATTATTCTGCTGTTTGACAGTCTGAATAAAAACTATTTGCCGCCCTATGGCGATTTGCTAACGAAAGCGCC TAACTTTCAACGCCTGGCGGCACATGCCGCCACCTTTGACAATAGTTATGTCGGCAGTATGCCCTGTATGCCAGCCCGTC GGGAACTGCACACCGGGCGCTATAATTTCCTGCATCGTGAGTGGGGCCCGCTGGAACCCTTTGATGATTCCATGCCGGAA TTATTGAAAAAAGCGGGGATCTACACCCATCTTATCAGCGATCATTTGCATTACTGGGAAGACGGCGGCGGTAACTACCA TAACCGCTATAGCTCCTGGGACGTAGTACGCGGTCAGGAGGGCGATCACTGGAAGGCAAGTGTTGGCGAGCCGCCCATTC CGGAAGTACTGCGCGTTCCACAAAAACAAACCGGAGGCGGCGTTTCCGGGCTATGGCGTCATGACTGGGCGAACCGCGAA TACATCCAGCAGGAAGCCGATTTTCCCCAGACGAAAGTTTTTGACGCCGGGTGCGATTTTATCCATAAAAATCATGCCGA AGATAACTGGTTATTGCAGGTTGAGACGTTCGATCCGCATGAACCGTTTTATACCACCGAGGAATATTTATCGCTCTATG ACGATGAGTGGCAAGGCCCGCATTATGACTGGCCGCGCGGCAAAGTCAGTGAAAGCGAGGAGGCGATAGCGCATATTCGC TGTCGTTATCGGGCCCTGGTTTCCATGTGCGACCGCAATCTTGGACGTATCCTTGATCTGATGGATGAACACGATCTCTG GCGCGATACGATGCTGATTGTCGGTACCGATCACGGCTTCTTGCTGGGGGAGCACGGTTGGTGGGCTAAAAATCAAATGC CCTATTATAACGAGGTGGCGAATAACCCGCTGTTTATCTGGGACCCGCGCAGCGCGGTATGCGGAGCGCGGCGGCAGTCG CTGGTGCAGATGATTGACTGGGCGCCAACGCTACTGGATTATTTTCAGCAACCTATTCCCGCAGATATGCAGGGCCAACC GCTGGCGAAAGTCATTGCCAGTGATGAACCCGTCAGGGAAGGCGCGCTGTTTGGCGTGTTTAGCGGACATGTTAATGTTA CCGACGGACGCTATGTTTATATGCGGGCCGCGCAACCGGGGCGTGAGCATGACATTGCGAACTACACGTTAATGCCGATC AAGATGAATGCGCGTTATGACGTGGATGAACTGGGAAAATTATCTCTGGCACCTCCGTTTAAATTCACTAAAGGGCTTCA GGTATTACGTATTCCGGCCAGGGAAAAATATAAAGGTGTGAATAGCTTTGGTCATCTCTTGTTTGATCTCAGAGACGATC CGCAGCAGCAACATCCTATTCATGATGAGGCCATCGAAGCAAGGATGATCAACTTACTTATCCGTTTGATGAAAGAAAAT GATGCTCCGGCGGAGCAGTATCGCCGTCTGGGTCTGGATGTTATCTAA
Upstream 100 bases:
>100_bases TCCCATTGAAAATATCATGGATGGCGAATCAATAGGTAAACAGATTTACGATGTGGTAGAGAAAAATTTTCCGCACCTGC TCAACAAATGAGGCTGAGTC
Downstream 100 bases:
>100_bases AAACGTAACAATGTTGTAAGCCGGGTACGCGTCAGCGTCACCCGGCAAGTATTAGTCCGAATCGCCTGTTGATGCAGGCG TTTGAGACTGATGACAAACT
Product: sulfatase
Products: NA
Alternate protein names: Cys-type sulfatase [H]
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MKAIILLFDSLNKNYLPPYGDLLTKAPNFQRLAAHAATFDNSYVGSMPCMPARRELHTGRYNFLHREWGPLEPFDDSMPE LLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWDVVRGQEGDHWKASVGEPPIPEVLRVPQKQTGGGVSGLWRHDWANRE YIQQEADFPQTKVFDAGCDFIHKNHAEDNWLLQVETFDPHEPFYTTEEYLSLYDDEWQGPHYDWPRGKVSESEEAIAHIR CRYRALVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVANNPLFIWDPRSAVCGARRQS LVQMIDWAPTLLDYFQQPIPADMQGQPLAKVIASDEPVREGALFGVFSGHVNVTDGRYVYMRAAQPGREHDIANYTLMPI KMNARYDVDELGKLSLAPPFKFTKGLQVLRIPAREKYKGVNSFGHLLFDLRDDPQQQHPIHDEAIEARMINLLIRLMKEN DAPAEQYRRLGLDVI
Sequences:
>Translated_495_residues MKAIILLFDSLNKNYLPPYGDLLTKAPNFQRLAAHAATFDNSYVGSMPCMPARRELHTGRYNFLHREWGPLEPFDDSMPE LLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWDVVRGQEGDHWKASVGEPPIPEVLRVPQKQTGGGVSGLWRHDWANRE YIQQEADFPQTKVFDAGCDFIHKNHAEDNWLLQVETFDPHEPFYTTEEYLSLYDDEWQGPHYDWPRGKVSESEEAIAHIR CRYRALVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVANNPLFIWDPRSAVCGARRQS LVQMIDWAPTLLDYFQQPIPADMQGQPLAKVIASDEPVREGALFGVFSGHVNVTDGRYVYMRAAQPGREHDIANYTLMPI KMNARYDVDELGKLSLAPPFKFTKGLQVLRIPAREKYKGVNSFGHLLFDLRDDPQQQHPIHDEAIEARMINLLIRLMKEN DAPAEQYRRLGLDVI >Mature_495_residues MKAIILLFDSLNKNYLPPYGDLLTKAPNFQRLAAHAATFDNSYVGSMPCMPARRELHTGRYNFLHREWGPLEPFDDSMPE LLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWDVVRGQEGDHWKASVGEPPIPEVLRVPQKQTGGGVSGLWRHDWANRE YIQQEADFPQTKVFDAGCDFIHKNHAEDNWLLQVETFDPHEPFYTTEEYLSLYDDEWQGPHYDWPRGKVSESEEAIAHIR CRYRALVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVANNPLFIWDPRSAVCGARRQS LVQMIDWAPTLLDYFQQPIPADMQGQPLAKVIASDEPVREGALFGVFSGHVNVTDGRYVYMRAAQPGREHDIANYTLMPI KMNARYDVDELGKLSLAPPFKFTKGLQVLRIPAREKYKGVNSFGHLLFDLRDDPQQQHPIHDEAIEARMINLLIRLMKEN DAPAEQYRRLGLDVI
Specific function: Has sulfatase activity toward para-nitrophenyl sulfate, which is increased in presence of calcium ion [H]
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 57188; Mature: 57188
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIILLFDSLNKNYLPPYGDLLTKAPNFQRLAAHAATFDNSYVGSMPCMPARRELHTGR CCEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCH YNFLHREWGPLEPFDDSMPELLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWDVVRGQE HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC GDHWKASVGEPPIPEVLRVPQKQTGGGVSGLWRHDWANREYIQQEADFPQTKVFDAGCDF CCCEECCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCEEECCCCHH IHKNHAEDNWLLQVETFDPHEPFYTTEEYLSLYDDEWQGPHYDWPRGKVSESEEAIAHIR HHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH CRYRALVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHC NNPLFIWDPRSAVCGARRQSLVQMIDWAPTLLDYFQQPIPADMQGQPLAKVIASDEPVRE CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC GALFGVFSGHVNVTDGRYVYMRAAQPGREHDIANYTLMPIKMNARYDVDELGKLSLAPPF CCEEEEEECEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCC KFTKGLQVLRIPAREKYKGVNSFGHLLFDLRDDPQQQHPIHDEAIEARMINLLIRLMKEN HHHCCCEEEECCCHHHHCCCCHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC DAPAEQYRRLGLDVI CCCHHHHHHCCCCCC >Mature Secondary Structure MKAIILLFDSLNKNYLPPYGDLLTKAPNFQRLAAHAATFDNSYVGSMPCMPARRELHTGR CCEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCH YNFLHREWGPLEPFDDSMPELLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWDVVRGQE HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC GDHWKASVGEPPIPEVLRVPQKQTGGGVSGLWRHDWANREYIQQEADFPQTKVFDAGCDF CCCEECCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCEEECCCCHH IHKNHAEDNWLLQVETFDPHEPFYTTEEYLSLYDDEWQGPHYDWPRGKVSESEEAIAHIR HHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH CRYRALVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHC NNPLFIWDPRSAVCGARRQSLVQMIDWAPTLLDYFQQPIPADMQGQPLAKVIASDEPVRE CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC GALFGVFSGHVNVTDGRYVYMRAAQPGREHDIANYTLMPIKMNARYDVDELGKLSLAPPF CCEEEEEECEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCC KFTKGLQVLRIPAREKYKGVNSFGHLLFDLRDDPQQQHPIHDEAIEARMINLLIRLMKEN HHHCCCEEEECCCHHHHCCCCHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC DAPAEQYRRLGLDVI CCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA