Click here to switch to the map view.

The map label for this gene is yiiZ [H]

Identifier: 194738179

GI number: 194738179

Start: 4142276

End: 4143259

Strand: Reverse

Name: yiiZ [H]

Synonym: SeSA_A4271

Alternate gene names: 194738179

Gene position: 4143259-4142276 (Counterclockwise)

Preceding gene: 194737962

Following gene: 194737674

Centisome position: 87.98

GC content: 53.05

Gene sequence:

>984_bases
ATGAAGCAACCTGGTTTTATACGTCTGGCTACGTTGGCCTTACTCTCCACACTCTCTTTCTTCTCCCACGGCGAAACCAT
TTTGCGCCTGGCCTACGCTGAAAATAGCCAGCCGGTAAAAGATGCGTTGCACTTCCTGGGGCAGCAAGTTGAAGAGAAAA
CGGGCGGCGATATCAAAGTACAGTACTTCCCGGACGGACAGCTTGGCGGCGAGCGCGAACTGGTGGAGTTGACGCAGGTC
GGCGTCGTCGACATCACTAAAGTGTCGTCCGGGCTGATGGAGAGTTTTTCGCCTGAGTACGGCGTGTTCTCACTTCCCTA
CCTGTTTGCCACCGTCGATGAATACTACCGCGTAATGGATAACCCACAGGTGATGGAGCCTGTTTATCAGTCCACCGCCG
CACAGGGGTTTGTCGGCGTAGGCTGGTATGATTCCGGCGCGCGTAATTTTTATATGAGCAAAGCGCCGGTTAAACGCATT
GAGGATTTACGCGGGAAGAAGATCCGCGTCATGCAGAGTGAGACGGCGATCCAAACTCTCAAACTGCTGGGCGCTTCGCC
CATCGCCATGAGCCAGGCGGAGGTCTATACCTCGTTACAACAAGGCATTCTCGACGGCGCGGAAAACAATGAGTTCGCTC
TCACCATCGCCCGCCACGGCGAAGTCGCCCGTTATTACACCTACGATATGCACACCCGCATTCCCGATATCCTGCTAATG
AGTACCCTCACGCTGGAAAAGCTGACGCCGGAACAGCAGCGCATCGTCGAAGCCGCCATCAAGGCGTCGATCGAATTTGA
GAAAGCCGCATGGGACAAGGAAATAGAGAAAACCAGGCTGGCGGCGGTAAAAGATTTCAACGTTGAATTCTACGAGATCG
ACAAAAAACCCTTCCAGAAGGCAGTACAGCCTATTTACGACGGTCTGAAAAACAAACCGCGGCTTTACGGGCTGTATCAA
CGTATCCAGACAGCAAAAAATTAA

Upstream 100 bases:

>100_bases
CTTTTGGTGCCAAATTTTGTCATCGGTGGCAAAATCAAGAAGGTTATAATTTCACCATGCAATTACATTCCCGGTAAATT
ATTACAATTGCGAGGGAATT

Downstream 100 bases:

>100_bases
TCTAATCAGGAAATTAAGATGAACACATTCAGAAAAGGACTTGATTTATTGCTGGGCGCTATCTGTTGCCTGGTGCTGGC
GATAATGGTTGGCATCGCCT

Product: trap dicarboxylate transporter dctp subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKQPGFIRLATLALLSTLSFFSHGETILRLAYAENSQPVKDALHFLGQQVEEKTGGDIKVQYFPDGQLGGERELVELTQV
GVVDITKVSSGLMESFSPEYGVFSLPYLFATVDEYYRVMDNPQVMEPVYQSTAAQGFVGVGWYDSGARNFYMSKAPVKRI
EDLRGKKIRVMQSETAIQTLKLLGASPIAMSQAEVYTSLQQGILDGAENNEFALTIARHGEVARYYTYDMHTRIPDILLM
STLTLEKLTPEQQRIVEAAIKASIEFEKAAWDKEIEKTRLAAVKDFNVEFYEIDKKPFQKAVQPIYDGLKNKPRLYGLYQ
RIQTAKN

Sequences:

>Translated_327_residues
MKQPGFIRLATLALLSTLSFFSHGETILRLAYAENSQPVKDALHFLGQQVEEKTGGDIKVQYFPDGQLGGERELVELTQV
GVVDITKVSSGLMESFSPEYGVFSLPYLFATVDEYYRVMDNPQVMEPVYQSTAAQGFVGVGWYDSGARNFYMSKAPVKRI
EDLRGKKIRVMQSETAIQTLKLLGASPIAMSQAEVYTSLQQGILDGAENNEFALTIARHGEVARYYTYDMHTRIPDILLM
STLTLEKLTPEQQRIVEAAIKASIEFEKAAWDKEIEKTRLAAVKDFNVEFYEIDKKPFQKAVQPIYDGLKNKPRLYGLYQ
RIQTAKN
>Mature_327_residues
MKQPGFIRLATLALLSTLSFFSHGETILRLAYAENSQPVKDALHFLGQQVEEKTGGDIKVQYFPDGQLGGERELVELTQV
GVVDITKVSSGLMESFSPEYGVFSLPYLFATVDEYYRVMDNPQVMEPVYQSTAAQGFVGVGWYDSGARNFYMSKAPVKRI
EDLRGKKIRVMQSETAIQTLKLLGASPIAMSQAEVYTSLQQGILDGAENNEFALTIARHGEVARYYTYDMHTRIPDILLM
STLTLEKLTPEQQRIVEAAIKASIEFEKAAWDKEIEKTRLAAVKDFNVEFYEIDKKPFQKAVQPIYDGLKNKPRLYGLYQ
RIQTAKN

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=300, Percent_Identity=28.6666666666667, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36912; Mature: 36912

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPGFIRLATLALLSTLSFFSHGETILRLAYAENSQPVKDALHFLGQQVEEKTGGDIKV
CCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE
QYFPDGQLGGERELVELTQVGVVDITKVSSGLMESFSPEYGVFSLPYLFATVDEYYRVMD
EEECCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHC
NPQVMEPVYQSTAAQGFVGVGWYDSGARNFYMSKAPVKRIEDLRGKKIRVMQSETAIQTL
CCHHHHHHHHHHHHCCCEEECEECCCCCCEEECCCHHHHHHHCCCCEEEEEHHHHHHHHH
KLLGASPIAMSQAEVYTSLQQGILDGAENNEFALTIARHGEVARYYTYDMHTRIPDILLM
HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEHHHCCHHHHHH
STLTLEKLTPEQQRIVEAAIKASIEFEKAAWDKEIEKTRLAAVKDFNVEFYEIDKKPFQK
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH
AVQPIYDGLKNKPRLYGLYQRIQTAKN
HHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQPGFIRLATLALLSTLSFFSHGETILRLAYAENSQPVKDALHFLGQQVEEKTGGDIKV
CCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE
QYFPDGQLGGERELVELTQVGVVDITKVSSGLMESFSPEYGVFSLPYLFATVDEYYRVMD
EEECCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHC
NPQVMEPVYQSTAAQGFVGVGWYDSGARNFYMSKAPVKRIEDLRGKKIRVMQSETAIQTL
CCHHHHHHHHHHHHCCCEEECEECCCCCCEEECCCHHHHHHHCCCCEEEEEHHHHHHHHH
KLLGASPIAMSQAEVYTSLQQGILDGAENNEFALTIARHGEVARYYTYDMHTRIPDILLM
HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEHHHCCHHHHHH
STLTLEKLTPEQQRIVEAAIKASIEFEKAAWDKEIEKTRLAAVKDFNVEFYEIDKKPFQK
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH
AVQPIYDGLKNKPRLYGLYQRIQTAKN
HHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]