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The map label for this gene is rfaB [H]

Identifier: 194737924

GI number: 194737924

Start: 3789891

End: 3790982

Strand: Reverse

Name: rfaB [H]

Synonym: SeSA_A3918

Alternate gene names: 194737924

Gene position: 3790982-3789891 (Counterclockwise)

Preceding gene: 194738265

Following gene: 194737566

Centisome position: 80.5

GC content: 39.29

Gene sequence:

>1092_bases
ATGGTGACTTCATTGAAAATAGCATTTATAGGCGAAGCGGTATCTGGTTTTGGAGGGATGGAAACCGTTATTAGCAACGT
TATCCATACGTTTGAAAATAGCTCTCCGAAAATCAACTGTGAAATGTTTTTCTTTTGTCGTAATGACAAAATGGATAAAG
CATGGCTAAAAGCGATTAAATATGCGCAATCATTCTCAAATATAAAATTAAGTTTTCTTCGTCGAGCTAAGCATGTTTAT
AATTTTAGTCAGTGGCTGAAAGAAACGTCACCGGATATTGTGATATGTATTGATGTCATCTCATGTCTTTATGCCAATAA
AGCACGAAAGAAAAGTGGTAAACAGTTTACTATTTTCTCGTGGCCGCATTTTTCGCTCGACCATAAAAAACATGCAGAAT
GTATAACGTACGCAGATTATCATCTGGCCATCAGTAGTGGTATTAAAGAACAGATGATGGCACGGGGTATCTCAGCGCAA
AATATTAGCGTCGTTTATAATCCTGTCTCTATTAAAACAATCATTGTGCCGTCGCCTGAGCGCGATAAACCCGCTGTATT
TCTCTATGTAGGGCGTCTTAAATTTGAAGGACAGAAAAGAGTTAAAGATTTATTTGATGGCTTAGCTCGTACGACAGGGG
AATGGCAGCTACATATTATTGGTGATGGCTCAGATTTTGAAAAGTGCCAGGCCTATAGTCGGGAGCTTGGTATTGAGCAG
CGTGTGATCTGGTATGGTTGGCAAAGCGCGCCGTGGCAAGTCGTACAGCAAAAAATAAAAAATGTCACCGCGTTACTACT
TACCTCTGCGTTTGAGGGATTTCCTATGACCCTGCTGGAAGCAATGTCATATGGAATTCCGTGTATTAGTTCTGATTGTA
TGTCTGGTCCGCGCGATATGATTAAACCCGGTTTGAATGGTGAGCTTTACACCCCGGGGGCTATAGATGATTTTGTAGGA
CACCTTAATCGTGTTATTTCTGGTGAAGTAAAATATCAGCATGATATTATTCCCGGCACGATTGAGAGATTTTACGATGT
GCTATATTTTAAAAATTTTAATAATGCAATATTCTCGAAATTACAAAAGTGA

Upstream 100 bases:

>100_bases
TTCGATTTTAATCAGGTCTCAGTATAAATATAGTGTTGATTGGGTTTGTTCTTACAGAATTTTAAAAGTGAAGGAAGCCG
AATAACATGAGTGTCAGCAA

Downstream 100 bases:

>100_bases
TCACTATGAGCAGAAAATATTTTGAAGAAGAAGTCATTCAACAGACTTTAGATTATAACTATGCACAACATAGTGATGCT
GATAAATTTAATATAGCTTA

Product: UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase

Products: NA

Alternate protein names: UDP-D-galactose--(Glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MVTSLKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKAIKYAQSFSNIKLSFLRRAKHVY
NFSQWLKETSPDIVICIDVISCLYANKARKKSGKQFTIFSWPHFSLDHKKHAECITYADYHLAISSGIKEQMMARGISAQ
NISVVYNPVSIKTIIVPSPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGDGSDFEKCQAYSRELGIEQ
RVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDMIKPGLNGELYTPGAIDDFVG
HLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSKLQK

Sequences:

>Translated_363_residues
MVTSLKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKAIKYAQSFSNIKLSFLRRAKHVY
NFSQWLKETSPDIVICIDVISCLYANKARKKSGKQFTIFSWPHFSLDHKKHAECITYADYHLAISSGIKEQMMARGISAQ
NISVVYNPVSIKTIIVPSPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGDGSDFEKCQAYSRELGIEQ
RVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDMIKPGLNGELYTPGAIDDFVG
HLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSKLQK
>Mature_363_residues
MVTSLKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKAIKYAQSFSNIKLSFLRRAKHVY
NFSQWLKETSPDIVICIDVISCLYANKARKKSGKQFTIFSWPHFSLDHKKHAECITYADYHLAISSGIKEQMMARGISAQ
NISVVYNPVSIKTIIVPSPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGDGSDFEKCQAYSRELGIEQ
RVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDMIKPGLNGELYTPGAIDDFVG
HLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSKLQK

Specific function: Adds a galactose goup to a glucose group of LPS [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=359, Percent_Identity=64.066852367688, Blast_Score=505, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41245; Mature: 41245

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTSLKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKAIK
CCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHH
YAQSFSNIKLSFLRRAKHVYNFSQWLKETSPDIVICIDVISCLYANKARKKSGKQFTIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEE
WPHFSLDHKKHAECITYADYHLAISSGIKEQMMARGISAQNISVVYNPVSIKTIIVPSPE
CCCCCCCCHHCCCCEEECHHHHHHHHCHHHHHHHCCCCCCCEEEEEECEEEEEEEECCCC
RDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGDGSDFEKCQAYSRELGIEQ
CCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCC
RVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDM
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHCCCCHHH
IKPGLNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSK
HCCCCCCCEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
LQK
HCC
>Mature Secondary Structure
MVTSLKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKAIK
CCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHH
YAQSFSNIKLSFLRRAKHVYNFSQWLKETSPDIVICIDVISCLYANKARKKSGKQFTIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEE
WPHFSLDHKKHAECITYADYHLAISSGIKEQMMARGISAQNISVVYNPVSIKTIIVPSPE
CCCCCCCCHHCCCCEEECHHHHHHHHCHHHHHHHCCCCCCCEEEEEECEEEEEEEECCCC
RDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGDGSDFEKCQAYSRELGIEQ
CCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCC
RVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDM
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHCCCCHHH
IKPGLNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSK
HCCCCCCCEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
LQK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9535865; 11677609; 8444813 [H]