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The map label for this gene is yfdC [H]

Identifier: 194737910

GI number: 194737910

Start: 2507514

End: 2508455

Strand: Direct

Name: yfdC [H]

Synonym: SeSA_A2622

Alternate gene names: 194737910

Gene position: 2507514-2508455 (Clockwise)

Preceding gene: 194734927

Following gene: 194734073

Centisome position: 53.25

GC content: 49.89

Gene sequence:

>942_bases
ATGGATAGCCTTAACGACGATAAAATTAACCGGCACAGCAGTGACCTGGAAGTTGAAAGCGAAGAAAAACAAAGCGGTAA
AGAGATTGAAGTGGATGAAGATCGTCTTCCTTCCCGCGCCATGGCGATTCATGAACATATTCGCCAGGATGGTGAAAAAG
AAATGGAACGCGATGCGATGGCTTTGCTCTGGTCAGCCATTGCCGCAGGACTTTCTATGGGGGCATCACTCCTGGCGAAA
GGGATTTTCCACGTGCAGCTTGAAGGCGTTCCCGGCGGCTTTTTACTGGAAAATCTCGGCTATACCTTTGGTTTTATCAT
TGTCATCATGGCCCGCCAGCAATTATTTACTGAAAATACCGTTACTGCCGTATTGCCGGTAATGCAAAATCCCACTCTGA
GTAACGTTGGCCTGCTGATGCGCTTATGGGGCGTAGTCTTATTGGGCAACCTTATTGGCACCGGGGTTGCGGCGTGGGCA
TTTGAATATATGCCTATATTTGATGAAGAGACCCGCGACGCCTTTGTCAAAATTGGTATGGAGGTCATGAAAAATAGCCC
AACGGAGATGTTTGCCAACGCGATTATCTCTGGCTGGATCATCGCCACAATGGTATGGATGTTTCCTGCTGCAGGCGGGG
CAAAAATTGTGGTCATTATTTTGATGACCTGGCTTATCGCGCTGGGCGATACCACCCATATTGTCGTCGGTTCCGTTGAA
ATTTTGTATTTGGTTTTCAACGGCACGCTGCCCTGGAGCGACTTTCTCTGGCCCTTCGCCCTTCCCACACTTGCCGGAAA
TATCTGCGGCGGCACCTTTATTTTCGCATTGATGAGCCACGCGCAGATCCGCAACGATATGAGCAATAAGCGTAAGGAAG
AAGCGAGGCTACGCGGCGAGCGCCTGGAACGGGAGCGGAAAAAAGCGGAAAAACAGCGCTGA

Upstream 100 bases:

>100_bases
AACGAGCGTGATCATTTTTATTTTTTCGGAGAATGCCCCGGCCTGGGTAAATGAAAAACCGCTACGCTTTATTAATATGT
GTTAATCAGCAGAGATCATC

Downstream 100 bases:

>100_bases
GTGGCGACGGTTTAACCAGTCAGGCGGCGCTACACTTACTCCGGCGAATAAAAAACGCTATACTGGCGGCGCGTTGTCCC
CTTAGTTAAATGGATATAAC

Product: inner membrane protein YfdC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAK
GIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWA
FEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVE
ILYLVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQR

Sequences:

>Translated_313_residues
MDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAK
GIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWA
FEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVE
ILYLVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQR
>Mature_313_residues
MDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAK
GIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWA
FEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVE
ILYLVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQR

Specific function: Unknown

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788689, Length=305, Percent_Identity=87.2131147540984, Blast_Score=539, Evalue=1e-155,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 34888; Mature: 34888

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAM
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCHHHHHHHHHH
ALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENT
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEYMPIFDEETRDAFVKIGM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCE
ILYLVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGE
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLERERKKAEKQR
HHHHHHHHHHCCC
>Mature Secondary Structure
MDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAM
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCHHHHHHHHHH
ALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENT
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEYMPIFDEETRDAFVKIGM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCE
ILYLVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGE
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLERERKKAEKQR
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]