| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is gsiB [H]
Identifier: 194737769
GI number: 194737769
Start: 973140
End: 974678
Strand: Direct
Name: gsiB [H]
Synonym: SeSA_A1000
Alternate gene names: 194737769
Gene position: 973140-974678 (Clockwise)
Preceding gene: 194734810
Following gene: 194737415
Centisome position: 20.67
GC content: 53.09
Gene sequence:
>1539_bases ATGACGCAATTTATTACGCATAAATGGCTGGTGGCGCTGGGACTGGCCTCATCCATTGCGGCTTTTCCGGCCCTGGCGGC CAAAGATGTGGTGGTGGCGGTAGGGTCTAATTTCACCACGCTCGATCCGTATGACGCCAACGATACACTCTCGCAGGCGG TGGCGAAGTCATTTTATCAGGGGCTGTTTGGCCTGGATAAAGACATGAAGGTAAAAAACGTCCTGGCGAAAGGCTATACC GTTTCTGATGACGGTCTGACCTACACCATTACCCTACGGCAGGGGGTGAAATTTCAGGACGGCGCGGATTTTGATGCGGC GGCGGTGAAAGCGAATCTCGATCGCGCCAGCAATCCGGATAACCACCTCAAGCGTTATAACCTGTATAAAAATATCGCAA AAACGGAGGTTGTCGACCCGGCAACGGTAAAAATTACCCTGAAACAGCCGTTCTCTGCTTTCATTAATATTCTGGCGCAC CCGGCGACGGCGATGATCTCGCCGCAAGCGCTGGAAAAATATGGCAAGGATATTGGTTTTCATCCGGTCGGTACCGGTCC ATACCAGCTTGAAACCTGGAATCAGACCGACTTTGTCAAAGTGAAAAAGTTCGCCGGTTACTGGCAGCAGGGCTTACCCA AGCTGGATTCTATTACCTGGCGTCCGGTTACTGACAACAATACCCGCGCGGCGATGCTGCAAACCGGCGAAGCGCAATTT GCTTTTCCTATCCCTTATGAGCAGGCCGCGTTACTGGCGAAAAATAAAAACCTCGAACTGGTCGCCAGCCCGTCCATTAT GCAGCGTTATATCAGTATGAATGTGACGCAGAAGCCGTTTGATAATCCTAAGGTGCGTGAGGCGTTGAATTACGCTATCA ATCGTCAGGCGCTGGTTAAAGTGGCGTTTGCCGGATACGCCACGCCGGCGACGGGCGTGGTGCCGCCGTCGATAGCCTAT GCGCAAAGCTATCAGCCGTGGCCCTATGATCCGGCTAAAGCGCGCGAACTGTTGAAAGAGGCGGGGTATCCAGACGGTTT CAGTACCACGCTGTGGTCATCGCACAACCATAGCACCGCGCAAAAAGTGTTGCAGTTTACCCAACAGCAACTGGCGCAGA TTGGCATTAAAGCCCGGATAACCGCGATGGACGCTGGCCAGCGCGCCGCGGAAGTTGAGGGCAAAGGGCAAAAAGAGAGC GGCGTGCGAATGTTCTATACCGGCTGGTCGGCGTCGACGGGCGAAGCTGACTGGGCGTTATCGCCGCTCTTCGCATCACA AAACTGGCCGCCGACGCAGTTTAATACCGCTTTTTACAGCAACAAGCAGGTCGACAGCGATTTGGCGGCGGCCTTAAAGA CCAACGATCCGCAGGAGAAAACACGATTATACAAAGAGGCGCAGGATATTATCTGGAAAGAGTCGCCCTGGATACCGTTG GTGGTGGAGAAATTGGTTTCTGCGCACAGTAAAAATTTGACCGGTTTCTGGATTATGCCGGATACCGGTTTCAGCTTTGA CGATGCGGATTTGAAGTAA
Upstream 100 bases:
>100_bases TACAGTTGATCGGGCCGGGACATTATGTTGCGCGGCCGCTGCAGGATAATGCGCTCTCGCGCTTATAACATTCAGACTGG CAGGGTTTCAGGAGAACAAC
Downstream 100 bases:
>100_bases GTAATGCGATGGGGCTGGATGGCGCGCGCGTTGTCCGCCATCCGGTAAAAGGTTCGTGTGATGCTTAACTATGTTCTCAA GCGCCTGCTGGGATTAATTC
Product: glutathione-binding protein GsiB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MTQFITHKWLVALGLASSIAAFPALAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKDMKVKNVLAKGYT VSDDGLTYTITLRQGVKFQDGADFDAAAVKANLDRASNPDNHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAH PATAMISPQALEKYGKDIGFHPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSITWRPVTDNNTRAAMLQTGEAQF AFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVTQKPFDNPKVREALNYAINRQALVKVAFAGYATPATGVVPPSIAY AQSYQPWPYDPAKARELLKEAGYPDGFSTTLWSSHNHSTAQKVLQFTQQQLAQIGIKARITAMDAGQRAAEVEGKGQKES GVRMFYTGWSASTGEADWALSPLFASQNWPPTQFNTAFYSNKQVDSDLAAALKTNDPQEKTRLYKEAQDIIWKESPWIPL VVEKLVSAHSKNLTGFWIMPDTGFSFDDADLK
Sequences:
>Translated_512_residues MTQFITHKWLVALGLASSIAAFPALAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKDMKVKNVLAKGYT VSDDGLTYTITLRQGVKFQDGADFDAAAVKANLDRASNPDNHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAH PATAMISPQALEKYGKDIGFHPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSITWRPVTDNNTRAAMLQTGEAQF AFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVTQKPFDNPKVREALNYAINRQALVKVAFAGYATPATGVVPPSIAY AQSYQPWPYDPAKARELLKEAGYPDGFSTTLWSSHNHSTAQKVLQFTQQQLAQIGIKARITAMDAGQRAAEVEGKGQKES GVRMFYTGWSASTGEADWALSPLFASQNWPPTQFNTAFYSNKQVDSDLAAALKTNDPQEKTRLYKEAQDIIWKESPWIPL VVEKLVSAHSKNLTGFWIMPDTGFSFDDADLK >Mature_511_residues TQFITHKWLVALGLASSIAAFPALAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKDMKVKNVLAKGYTV SDDGLTYTITLRQGVKFQDGADFDAAAVKANLDRASNPDNHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAHP ATAMISPQALEKYGKDIGFHPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSITWRPVTDNNTRAAMLQTGEAQFA FPIPYEQAALLAKNKNLELVASPSIMQRYISMNVTQKPFDNPKVREALNYAINRQALVKVAFAGYATPATGVVPPSIAYA QSYQPWPYDPAKARELLKEAGYPDGFSTTLWSSHNHSTAQKVLQFTQQQLAQIGIKARITAMDAGQRAAEVEGKGQKESG VRMFYTGWSASTGEADWALSPLFASQNWPPTQFNTAFYSNKQVDSDLAAALKTNDPQEKTRLYKEAQDIIWKESPWIPLV VEKLVSAHSKNLTGFWIMPDTGFSFDDADLK
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=512, Percent_Identity=88.4765625, Blast_Score=944, Evalue=0.0, Organism=Escherichia coli, GI1789966, Length=468, Percent_Identity=28.6324786324786, Blast_Score=196, Evalue=3e-51, Organism=Escherichia coli, GI1787551, Length=535, Percent_Identity=27.4766355140187, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1787762, Length=511, Percent_Identity=25.8317025440313, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1789887, Length=508, Percent_Identity=26.1811023622047, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1787495, Length=514, Percent_Identity=24.3190661478599, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1789397, Length=528, Percent_Identity=24.2424242424242, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI87081878, Length=503, Percent_Identity=20.2783300198807, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 56581; Mature: 56449
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFITHKWLVALGLASSIAAFPALAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCCCCHHHHHHHHHHHHH GLFGLDKDMKVKNVLAKGYTVSDDGLTYTITLRQGVKFQDGADFDAAAVKANLDRASNPD HHHCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCH NHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAHPATAMISPQALEKYGKDIGF HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCHHHHCCHHHHHHHCCCCCC HPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSITWRPVTDNNTRAAMLQTGEAQF CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHCEEEEECCCCCCEEEEEECCCCCE AFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVTQKPFDNPKVREALNYAINRQALVK EECCCHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHH VAFAGYATPATGVVPPSIAYAQSYQPWPYDPAKARELLKEAGYPDGFSTTLWSSHNHSTA HHHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCHHHH QKVLQFTQQQLAQIGIKARITAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWAL HHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEE SPLFASQNWPPTQFNTAFYSNKQVDSDLAAALKTNDPQEKTRLYKEAQDIIWKESPWIPL CHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHH VVEKLVSAHSKNLTGFWIMPDTGFSFDDADLK HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TQFITHKWLVALGLASSIAAFPALAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCCCCHHHHHHHHHHHHH GLFGLDKDMKVKNVLAKGYTVSDDGLTYTITLRQGVKFQDGADFDAAAVKANLDRASNPD HHHCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCH NHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAHPATAMISPQALEKYGKDIGF HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCHHHHCCHHHHHHHCCCCCC HPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSITWRPVTDNNTRAAMLQTGEAQF CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHCEEEEECCCCCCEEEEEECCCCCE AFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVTQKPFDNPKVREALNYAINRQALVK EECCCHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHH VAFAGYATPATGVVPPSIAYAQSYQPWPYDPAKARELLKEAGYPDGFSTTLWSSHNHSTA HHHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCHHHH QKVLQFTQQQLAQIGIKARITAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWAL HHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEE SPLFASQNWPPTQFNTAFYSNKQVDSDLAAALKTNDPQEKTRLYKEAQDIIWKESPWIPL CHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHH VVEKLVSAHSKNLTGFWIMPDTGFSFDDADLK HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA