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The map label for this gene is ybgK [H]

Identifier: 194737707

GI number: 194737707

Start: 845257

End: 846189

Strand: Direct

Name: ybgK [H]

Synonym: SeSA_A0870

Alternate gene names: 194737707

Gene position: 845257-846189 (Clockwise)

Preceding gene: 194737279

Following gene: 194734966

Centisome position: 17.95

GC content: 57.88

Gene sequence:

>933_bases
ATGCTGAATATTATTCGCGCGGGGATTTACACCTCCGTGCAGGATAGCGGACGTCACGGCTTTCGTCAGTCGGGGCTGAG
TCACTGCGGTGCGCTGGATAAACCCGCCTTTCAGACCGCTAATCTCCTGGTCGGGAACGATGCGAATGCCCCGGCGCTGG
AAATCACTCTCGGTCAACTGGTTGTCGAATTTGAAAATGAGACCTGGTTCGCTCTTACCGGCGCAGGCTGCGAGGCGCAG
TTGGATGATCAACCGGTCTGGACAGGCTGGCGATTGCCGGTAAAAGCGGGTCAGCGCCTCACGTTGCATCGACCGCTTCA
CGGGATGCGTAGCTATCTGGCGGTAGCGGGCGGTATTGCTGTGCCGGAGGTGATGGGATCGTGTAGTACCGATCTGAAGT
CCGGTATCGGTGGGCTGGAAGGACGGCTGCTAAAAGATGGCGATCGGCTGGCGACGGGTAAACCATCGCGACAGTTTAGC
GGGCCGCAGGGCGTGAAGCAGTTACTGTGGGGGAATCGCATTCGTGCGCTGCCGGGGCCGGAATACCGTGAGTTCGATCG
CGCCTCGCAAGAAGCGTTCTGGCGTTCGCCGTGGCAACTCAGTCCGCAAAGTAATCGCATGGGCTATCGGTTGCAGGGAC
AATCGTTAACACGGACAACGGATCGCGAACTGTTGTCGCACGGTTTGCTGCCCGGTGTCGTACAGGTGCCTTACAACGGT
CAACCTATTGTGCTAATGAATGATGCCCAGACAACTGGCGGCTATCCGCGCATTGCCTGCATCATCGAGGCAGATATGTA
CCATCTGGCGCAGATTCCGCTAGGGCAACCGATCCATTTTGTGCAATGTTCGCTGGAAGAGGCGCTCAACGCGCGCCGCG
AGCGTCAGCGCTATCTGGAACAGCTTACCTGGCGACTTCAGCATGAACATTGA

Upstream 100 bases:

>100_bases
TCGGCCTCACGCCGTTGAAGTTATTCGATCCGATGCGGGAGCCTCCGGTTCTGCTACGCCCTGGCGATAGCGTACGCTTT
GTGCCGCAAAAGGAGGGAAT

Downstream 100 bases:

>100_bases
TTTAAATGCGGATTTGGGCGAAGGTTGCGCCAGCGACAGCGAATTATTAACGCTGGTCTCCTCCGCCAATATCGCCTGTG
GTTTTCACGCCGGTGATGCG

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MLNIIRAGIYTSVQDSGRHGFRQSGLSHCGALDKPAFQTANLLVGNDANAPALEITLGQLVVEFENETWFALTGAGCEAQ
LDDQPVWTGWRLPVKAGQRLTLHRPLHGMRSYLAVAGGIAVPEVMGSCSTDLKSGIGGLEGRLLKDGDRLATGKPSRQFS
GPQGVKQLLWGNRIRALPGPEYREFDRASQEAFWRSPWQLSPQSNRMGYRLQGQSLTRTTDRELLSHGLLPGVVQVPYNG
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALNARRERQRYLEQLTWRLQHEH

Sequences:

>Translated_310_residues
MLNIIRAGIYTSVQDSGRHGFRQSGLSHCGALDKPAFQTANLLVGNDANAPALEITLGQLVVEFENETWFALTGAGCEAQ
LDDQPVWTGWRLPVKAGQRLTLHRPLHGMRSYLAVAGGIAVPEVMGSCSTDLKSGIGGLEGRLLKDGDRLATGKPSRQFS
GPQGVKQLLWGNRIRALPGPEYREFDRASQEAFWRSPWQLSPQSNRMGYRLQGQSLTRTTDRELLSHGLLPGVVQVPYNG
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALNARRERQRYLEQLTWRLQHEH
>Mature_310_residues
MLNIIRAGIYTSVQDSGRHGFRQSGLSHCGALDKPAFQTANLLVGNDANAPALEITLGQLVVEFENETWFALTGAGCEAQ
LDDQPVWTGWRLPVKAGQRLTLHRPLHGMRSYLAVAGGIAVPEVMGSCSTDLKSGIGGLEGRLLKDGDRLATGKPSRQFS
GPQGVKQLLWGNRIRALPGPEYREFDRASQEAFWRSPWQLSPQSNRMGYRLQGQSLTRTTDRELLSHGLLPGVVQVPYNG
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALNARRERQRYLEQLTWRLQHEH

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=310, Percent_Identity=85.1612903225806, Blast_Score=544, Evalue=1e-156,
Organism=Saccharomyces cerevisiae, GI6319685, Length=326, Percent_Identity=30.9815950920245, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 34400; Mature: 34400

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIIRAGIYTSVQDSGRHGFRQSGLSHCGALDKPAFQTANLLVGNDANAPALEITLGQL
CCCEEECCHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHCCEEEEECCCCCCEEEEEEEEE
VVEFENETWFALTGAGCEAQLDDQPVWTGWRLPVKAGQRLTLHRPLHGMRSYLAVAGGIA
EEEECCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHCCCH
VPEVMGSCSTDLKSGIGGLEGRLLKDGDRLATGKPSRQFSGPQGVKQLLWGNRIRALPGP
HHHHHHCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCC
EYREFDRASQEAFWRSPWQLSPQSNRMGYRLQGQSLTRTTDRELLSHGLLPGVVQVPYNG
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCEEECCCCC
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALNARRERQRYLE
CCEEEECCCCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLTWRLQHEH
HHHHHHCCCC
>Mature Secondary Structure
MLNIIRAGIYTSVQDSGRHGFRQSGLSHCGALDKPAFQTANLLVGNDANAPALEITLGQL
CCCEEECCHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHCCEEEEECCCCCCEEEEEEEEE
VVEFENETWFALTGAGCEAQLDDQPVWTGWRLPVKAGQRLTLHRPLHGMRSYLAVAGGIA
EEEECCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHCCCH
VPEVMGSCSTDLKSGIGGLEGRLLKDGDRLATGKPSRQFSGPQGVKQLLWGNRIRALPGP
HHHHHHCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCC
EYREFDRASQEAFWRSPWQLSPQSNRMGYRLQGQSLTRTTDRELLSHGLLPGVVQVPYNG
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCEEECCCCC
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALNARRERQRYLE
CCEEEECCCCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLTWRLQHEH
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]