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The map label for this gene is rfbV [H]

Identifier: 194737653

GI number: 194737653

Start: 2189161

End: 2190162

Strand: Reverse

Name: rfbV [H]

Synonym: SeSA_A2320

Alternate gene names: 194737653

Gene position: 2190162-2189161 (Counterclockwise)

Preceding gene: 194738297

Following gene: 194738027

Centisome position: 46.51

GC content: 32.73

Gene sequence:

>1002_bases
ATGCTTGTATCATTTTGTATTCCAACTTATAATAGAAAAGAATACCTTGAAGAGTTGTTAAATAGTATAAATAATCAGGA
AAAATTTAATTTAGATATTGAGATATGCATATCAGATAATGCCTCTACTGATGGTACAGAGGAAATGATTGATGTTTGGA
GGAATAATTATAATTTCCCAATAATATATCGGCGTAATAGCGTTAACCTTGGGCCGGATAGGAATTTTCTTGCTTCAGTA
TCCCTTGCGAATGGGGATTATTGTTGGATATTTGGCAGTGATGATGCTCTTGCGAAAGACTCGTTAGCGATATTACAAAC
TTATCTCGATTCTCAAGCAGATATATATTTATGTGACAGAAAAGAGACCGGGTGTGATTTAGCTGAGATTAGAAATCCTC
ATCGTTCCTGGCTCAGAACAGATGATGAGCTTTATGTGTTTAATAATAATTTAGATAGGGAAATCTATCTCAGTAGATGC
TTATCTATTGGTGGCGTATTTAGCTATCTAAGTTCTTTAATAGTAAAAAAAGAACGATGGGATGCCATTGATTTTGATGC
GTCCTATATTGGCACTTCCTATCCTCATGTATTTATCATGATGAGCGTATTTAATACGCCTGGGTGCCTTTTGCATTATA
TATCAAAACCACTCGTAATATGTCGAGGAGATAATGATAGTTTCGAGAAGAAAGGAAAGGCCAGACGAATATTAATTGAT
TTTATTGCATATTTAAAATTAGCTAATGATTTTTACAGTAAAAATATATCTTTAAAACGAGCATTTGAAAATGTTTTGCT
AAAAGAGAGACCATGGTTATATACAACTTTGGCTATGGCATGTTATGGCAATAGTGATGAAAAAAGAGATTTATCTGAAT
TTTATGCAAAGCTAGGTTGTAATAAAAATATGATCAACACTGTACTTCGATTTGGGAAACTAGCATATGCAGTGAAAAAT
ATTACCGTGCTTAAGAATTTTACTAAACGGATAATTAAGTAG

Upstream 100 bases:

>100_bases
ATCAGCGGAGTGCTACTTGGCTTGATTATATCTTTTGCTTTAACTGTTTTTTGGGGGCTTCCACTAACTTACTTAATTAA
GGCAAATAAGGAATAATCAT

Downstream 100 bases:

>100_bases
CCGTAAGCTATTGACCTTCCCCCTGTAAACAGTGCCAGTCTAAACTGAAGTTTCCGGCCTTTCTTCCATCTCACAGAGAG
GCGCATTGCCATGAAAAAGA

Product: O antigen biosynthesis abequosyltransferase RfbV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLVSFCIPTYNRKEYLEELLNSINNQEKFNLDIEICISDNASTDGTEEMIDVWRNNYNFPIIYRRNSVNLGPDRNFLASV
SLANGDYCWIFGSDDALAKDSLAILQTYLDSQADIYLCDRKETGCDLAEIRNPHRSWLRTDDELYVFNNNLDREIYLSRC
LSIGGVFSYLSSLIVKKERWDAIDFDASYIGTSYPHVFIMMSVFNTPGCLLHYISKPLVICRGDNDSFEKKGKARRILID
FIAYLKLANDFYSKNISLKRAFENVLLKERPWLYTTLAMACYGNSDEKRDLSEFYAKLGCNKNMINTVLRFGKLAYAVKN
ITVLKNFTKRIIK

Sequences:

>Translated_333_residues
MLVSFCIPTYNRKEYLEELLNSINNQEKFNLDIEICISDNASTDGTEEMIDVWRNNYNFPIIYRRNSVNLGPDRNFLASV
SLANGDYCWIFGSDDALAKDSLAILQTYLDSQADIYLCDRKETGCDLAEIRNPHRSWLRTDDELYVFNNNLDREIYLSRC
LSIGGVFSYLSSLIVKKERWDAIDFDASYIGTSYPHVFIMMSVFNTPGCLLHYISKPLVICRGDNDSFEKKGKARRILID
FIAYLKLANDFYSKNISLKRAFENVLLKERPWLYTTLAMACYGNSDEKRDLSEFYAKLGCNKNMINTVLRFGKLAYAVKN
ITVLKNFTKRIIK
>Mature_333_residues
MLVSFCIPTYNRKEYLEELLNSINNQEKFNLDIEICISDNASTDGTEEMIDVWRNNYNFPIIYRRNSVNLGPDRNFLASV
SLANGDYCWIFGSDDALAKDSLAILQTYLDSQADIYLCDRKETGCDLAEIRNPHRSWLRTDDELYVFNNNLDREIYLSRC
LSIGGVFSYLSSLIVKKERWDAIDFDASYIGTSYPHVFIMMSVFNTPGCLLHYISKPLVICRGDNDSFEKKGKARRILID
FIAYLKLANDFYSKNISLKRAFENVLLKERPWLYTTLAMACYGNSDEKRDLSEFYAKLGCNKNMINTVLRFGKLAYAVKN
ITVLKNFTKRIIK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 38537; Mature: 38537

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSFCIPTYNRKEYLEELLNSINNQEKFNLDIEICISDNASTDGTEEMIDVWRNNYNFP
CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCE
IIYRRNSVNLGPDRNFLASVSLANGDYCWIFGSDDALAKDSLAILQTYLDSQADIYLCDR
EEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECC
KETGCDLAEIRNPHRSWLRTDDELYVFNNNLDREIYLSRCLSIGGVFSYLSSLIVKKERW
CCCCCCHHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAIDFDASYIGTSYPHVFIMMSVFNTPGCLLHYISKPLVICRGDNDSFEKKGKARRILID
CEECCCHHHCCCCCCHHEEEEHHHCCCHHHHHHHCCCEEEEECCCCCHHHCCCHHHHHHH
FIAYLKLANDFYSKNISLKRAFENVLLKERPWLYTTLAMACYGNSDEKRDLSEFYAKLGC
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
NKNMINTVLRFGKLAYAVKNITVLKNFTKRIIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVSFCIPTYNRKEYLEELLNSINNQEKFNLDIEICISDNASTDGTEEMIDVWRNNYNFP
CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCE
IIYRRNSVNLGPDRNFLASVSLANGDYCWIFGSDDALAKDSLAILQTYLDSQADIYLCDR
EEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECC
KETGCDLAEIRNPHRSWLRTDDELYVFNNNLDREIYLSRCLSIGGVFSYLSSLIVKKERW
CCCCCCHHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAIDFDASYIGTSYPHVFIMMSVFNTPGCLLHYISKPLVICRGDNDSFEKKGKARRILID
CEECCCHHHCCCCCCHHEEEEHHHCCCHHHHHHHCCCEEEEECCCCCHHHCCCHHHHHHH
FIAYLKLANDFYSKNISLKRAFENVLLKERPWLYTTLAMACYGNSDEKRDLSEFYAKLGC
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
NKNMINTVLRFGKLAYAVKNITVLKNFTKRIIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]