| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yfcF [H]
Identifier: 194737625
GI number: 194737625
Start: 2462725
End: 2463369
Strand: Reverse
Name: yfcF [H]
Synonym: SeSA_A2577
Alternate gene names: 194737625
Gene position: 2463369-2462725 (Counterclockwise)
Preceding gene: 194737307
Following gene: 194736823
Centisome position: 52.31
GC content: 56.43
Gene sequence:
>645_bases ATGAGTAAGCCTGTTATTGTGCTGTGGTCGGATGCGAACTTTTTCTCTCCCTACGTCTTGTCCGCCTGGGTGGCATTACA AGAAAAAGGGCTTTCCTTTACTCTGAAAACCCGCGATCTGGACCAGGGAGAACATCTGCAACCTGGCTGGCGGGGATATG CGCTGACGCAGCGCGTACCGGTGCTTGAGGCCGACAATTTTGAGCTGAGCGAGTCGTCCGCTATTGCGGAATACCTGGAG GAGCGTTTCGCGCCGCCGCAGTGGGAGCGTATCTACCCGCACGATTTACAAAAACGCGCCCGCGCGCGACAGATTCAGGC GTGGCTACGCAGCGATTTACTGCCGCTTCGCGAAGAACGGCCTACCGACGTGGTGTTTGCCGGGGCGAAAAAAGCGCCGC TAAGCGAGGCTGGAAAAGCCAGTGCGGCAAAACTGTTTGCGACGGCTGAAGCGCTATTGGGGCAGGGGACGCAAAATTTA TTTGGTGAATGGTGCATTGCCGATACCGATCTGGCATTGATGATCAATCGTCTGGCGCTGCATGGCGATGACGTGCCGGC ATCGCTGTCGGCATATGCGACATTCCAGTGGCAGCGTGCTTCCGTACAGCGTTTTATTGCGCTTTCCTCGAAGCGTTCAG GCTGA
Upstream 100 bases:
>100_bases TATAGAAAGCCTCCTGATGTGTGTGAGTTTTCATCAGGTGACAGCAGGCGAAAGACGCTATATTTTGGGAAGAAACTTAA TACGCCCTCAAGAGGACATT
Downstream 100 bases:
>100_bases AAATCTATTCATATTCCAGTATCATAACGCCGTTTTTCACAACGAGGAGTGAGCGATGAAACTGATGTTCGCATCGGACA TTCATGGTTCTTTACCCGCC
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSKPVIVLWSDANFFSPYVLSAWVALQEKGLSFTLKTRDLDQGEHLQPGWRGYALTQRVPVLEADNFELSESSAIAEYLE ERFAPPQWERIYPHDLQKRARARQIQAWLRSDLLPLREERPTDVVFAGAKKAPLSEAGKASAAKLFATAEALLGQGTQNL FGEWCIADTDLALMINRLALHGDDVPASLSAYATFQWQRASVQRFIALSSKRSG
Sequences:
>Translated_214_residues MSKPVIVLWSDANFFSPYVLSAWVALQEKGLSFTLKTRDLDQGEHLQPGWRGYALTQRVPVLEADNFELSESSAIAEYLE ERFAPPQWERIYPHDLQKRARARQIQAWLRSDLLPLREERPTDVVFAGAKKAPLSEAGKASAAKLFATAEALLGQGTQNL FGEWCIADTDLALMINRLALHGDDVPASLSAYATFQWQRASVQRFIALSSKRSG >Mature_213_residues SKPVIVLWSDANFFSPYVLSAWVALQEKGLSFTLKTRDLDQGEHLQPGWRGYALTQRVPVLEADNFELSESSAIAEYLEE RFAPPQWERIYPHDLQKRARARQIQAWLRSDLLPLREERPTDVVFAGAKKAPLSEAGKASAAKLFATAEALLGQGTQNLF GEWCIADTDLALMINRLALHGDDVPASLSAYATFQWQRASVQRFIALSSKRSG
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788639, Length=214, Percent_Identity=80.8411214953271, Blast_Score=355, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23963; Mature: 23832
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPVIVLWSDANFFSPYVLSAWVALQEKGLSFTLKTRDLDQGEHLQPGWRGYALTQRVP CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEHHCCCC VLEADNFELSESSAIAEYLEERFAPPQWERIYPHDLQKRARARQIQAWLRSDLLPLREER EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PTDVVFAGAKKAPLSEAGKASAAKLFATAEALLGQGTQNLFGEWCIADTDLALMINRLAL CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHH HGDDVPASLSAYATFQWQRASVQRFIALSSKRSG CCCCCCCCHHHHEEEEHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKPVIVLWSDANFFSPYVLSAWVALQEKGLSFTLKTRDLDQGEHLQPGWRGYALTQRVP CCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEHHCCCC VLEADNFELSESSAIAEYLEERFAPPQWERIYPHDLQKRARARQIQAWLRSDLLPLREER EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PTDVVFAGAKKAPLSEAGKASAAKLFATAEALLGQGTQNLFGEWCIADTDLALMINRLAL CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHH HGDDVPASLSAYATFQWQRASVQRFIALSSKRSG CCCCCCCCHHHHEEEEHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]