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The map label for this gene is erfK [H]

Identifier: 194737599

GI number: 194737599

Start: 2075825

End: 2076754

Strand: Reverse

Name: erfK [H]

Synonym: SeSA_A2184

Alternate gene names: 194737599

Gene position: 2076754-2075825 (Counterclockwise)

Preceding gene: 194736398

Following gene: 194737270

Centisome position: 44.1

GC content: 52.04

Gene sequence:

>930_bases
ATGCGTCGTATCACACCTTTTTTTCCGTTTTTCGTCTTGTTGGTAAGCCATTTCTCGCTGGCTATAAGCTATCCGTTGCC
GCCCGAAGGCAGTCGTCTGGTAGGACAGCCTGTCACAATCACCGTACCGCAGAACAATACTCAGCCCTTAGAGTCATTTG
CCGCCCGCTACGGTCAGGGGCTGAGTAATATGCTTGAAGCGAATCCCGGCGTGGATGTGTTTTTACCTCAGTCTGGTTCC
ACACTGGTGGTGCCGCAGCAGTTGATTCTGCCTGACACCGTTCGTGAAGGTATTGTGGTAAACGTCGCCGAGATGCGCCT
TTATTATTATCCCGCAGGCACGAATACGGTTGAGGTGCTACCTATTGGTATTGGTCAGGCTGGCCGTGAAACGCCGCGCA
ACTGGGTAACTGCGGTTGAACGCAAACAAGATGGCCCGGTTTGGGTGCCAACGGCTAATACGCGTCGGGAATATGCTAAA
GAGGGAAAAACGCTGCCCGCGATGGTGCCTGCGGGGCCGGATAACCCTATGGGGCTATACGCAATATATATCGGCAGGTT
ATATGCCATCCATGGCACTAATGCTAACTTTGGCATTGGCCTTCGCGTCAGTCAGGGCTGTATCCGTTTACGCAATGACG
ATATTAAATATTTATTCGACCATGTTCCTGTAGGAACCCGCGTTCAGATTATCGACAGGCCCGTTAAATTTTCGGTAGAG
CCGGATGGCAGTCGTTGGCTGGAGGTACACGAACCGCTTTCTCGTAACCGTGCTGAATTTGAGTCAGACAAAAAAGTTCC
ATTGCCCGTTACGCCAGTGCTGCGCACGTTTATCAAAGGGGATGACGTTGATACTTCGCGGGTTAATGAGGTGCTGGAGC
GCCGTTCCGGAATGCCGGTCAACATTAGCGCAGGCAGGTCTGGCCTTTAA

Upstream 100 bases:

>100_bases
AGGGGAACGCAAACGCAACATAACCCGGGCGCACAACACCAGCCATGTGAGAAAAAAGCTATACTTAACGCACACCTGCC
GCGACAAAGGAAGGGATATA

Downstream 100 bases:

>100_bases
ATATCCTGCCACATTGCTGGTTTTCATGGGCTGGAGTATCTGTATTAGTAGTGAGTGTCATGGCAGGGGCTCCATTTCTC
AGCGAACCGTGAGGCCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTITVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRSGL

Sequences:

>Translated_309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTITVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRSGL
>Mature_309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTITVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRSGL

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=305, Percent_Identity=80, Blast_Score=514, Evalue=1e-147,
Organism=Escherichia coli, GI1787040, Length=294, Percent_Identity=64.9659863945578, Blast_Score=400, Evalue=1e-113,
Organism=Escherichia coli, GI1787356, Length=285, Percent_Identity=49.8245614035088, Blast_Score=275, Evalue=3e-75,
Organism=Escherichia coli, GI1787968, Length=306, Percent_Identity=45.0980392156863, Blast_Score=239, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 34201; Mature: 34201

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTITVPQNNTQPLESFAARYGQG
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL
HHHHHHCCCCCEEEECCCCCEEECCHHHCCCHHHHCCEEEEEEEEEEEEEECCCCEEEEE
PIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
EEEEEEEEEEECCCCCCEEEEEECCCEEEECCCCHHHHHHHCCCCCEEEEEECCEEEEEC
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPV
CCCCCEEEECCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISAGRSGL
EECCCCCCC
>Mature Secondary Structure
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTITVPQNNTQPLESFAARYGQG
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL
HHHHHHCCCCCEEEECCCCCEEECCHHHCCCHHHHCCEEEEEEEEEEEEEECCCCEEEEE
PIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
EEEEEEEEEEECCCCCCEEEEEECCCEEEECCCCHHHHHHHCCCCCEEEEEECCEEEEEC
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPV
CCCCCEEEECCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISAGRSGL
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7883701; 11677609 [H]