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The map label for this gene is papB [H]

Identifier: 194737547

GI number: 194737547

Start: 4454804

End: 4455094

Strand: Direct

Name: papB [H]

Synonym: SeSA_A4577

Alternate gene names: 194737547

Gene position: 4454804-4455094 (Clockwise)

Preceding gene: 194736934

Following gene: 194737884

Centisome position: 94.6

GC content: 47.08

Gene sequence:

>291_bases
TTGAAACTGAATAAAAAATCATTTTCCGGCGTCAGGATAGTGAGGGCCGGGGAACTCGAACCGGGGGCAGTGTCCGAAGA
GCAGTTCTGGCTACTTGTTGATATATCCCCGATACACAGTGAAAAGATTATTCTGGCCCTGAAAGATTATTTCGTTTCCG
GGTATTCCAGAAAGGTTGTGTGCGAACGCCACGGTATGAGTGGCGGGTATCTCAGCACCAGTGTTAACCGGCTGAATTTT
ATCAGCAGGAATGTGCATAAACTGGCGGGTTATTACAGCCATCATGAATGA

Upstream 100 bases:

>100_bases
CAGCATTAATCTCTTAAATATAATAAGCGAAAAGATTAGTTATCTTCCCTTTACATGTTTTCCTTGCCGGGAAGGTTAAG
GAAAAGTTAAGGAAGTTCCG

Downstream 100 bases:

>100_bases
TAAAGCAGACTGAACCGTCTGCTCCGGATTTGCGATGAAAAAAATAAAGATACTTTTCCTTCTGCTGCTGGCAGGGGGCG
GGCTTTCTCACGCTTCCGTT

Product: PefB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKLNKKSFSGVRIVRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVVCERHGMSGGYLSTSVNRLNF
ISRNVHKLAGYYSHHE

Sequences:

>Translated_96_residues
MKLNKKSFSGVRIVRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVVCERHGMSGGYLSTSVNRLNF
ISRNVHKLAGYYSHHE
>Mature_96_residues
MKLNKKSFSGVRIVRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVVCERHGMSGGYLSTSVNRLNF
ISRNVHKLAGYYSHHE

Specific function: May act as both positive and negative regulator of pap transcription. Might positively regulate levels of papI and/or mbf. Its autoregulatory mode of action involves differential binding to separate sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004356 [H]

Pfam domain/function: PF03333 PapB [H]

EC number: NA

Molecular weight: Translated: 10884; Mature: 10884

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKKSFSGVRIVRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVV
CCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCEEE
CERHGMSGGYLSTSVNRLNFISRNVHKLAGYYSHHE
EECCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLNKKSFSGVRIVRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVV
CCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCEEE
CERHGMSGGYLSTSVNRLNFISRNVHKLAGYYSHHE
EECCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2868893; 1357526; 2568258 [H]