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The map label for this gene is ycfK [H]

Identifier: 194737320

GI number: 194737320

Start: 2128065

End: 2129609

Strand: Reverse

Name: ycfK [H]

Synonym: SeSA_A2246

Alternate gene names: 194737320

Gene position: 2129609-2128065 (Counterclockwise)

Preceding gene: 194737967

Following gene: 194734938

Centisome position: 45.22

GC content: 48.48

Gene sequence:

>1545_bases
ATGCACAGAATTGATACGCCCACCGCGCAAAAAGATAAATTTGGTCAGGGAAAAAACGGATTTACGAATGGTGATCCCGC
CACGGGCCGCCGCGCAACGGATCTCAACAGTGATATGTGGGATGCAGTCCAGGAAGAGGTCTGCACTGTTATTGAAGCCG
CCGGCATACAACTCAGTAAAGGCGAACATACGCAGCTTCACGCCGCCATTGGCAGGCTGATCGATGAACAGGTTAAAACC
CGTCTTGAAAAAAATCAGAATGGCGCGGACATCCCGAATAAGCCGCTGTTTCTCCAGAACGTTGGTTTAGGAGAAACGAT
AAATCTCGCTGCGGGTGCACTGCAAAAATCGCAGAATGGCGGCGATATTCCGGACAAAAAACAATTTGCGAGAACTATCG
GCGCGGTAACATCGACTACCATTACACTTGGTGAATCAGGCTGGTTCAAAATCGCCACGGTTGTAATGCCGCAGGCTACA
TCAACAGCGGTGATTAAACTGTACGGTGGGGCGGGGTTTAACGCTGGTTCACCTGAACAGGCGGCAATCAGCGAACTGGT
ATTGCGTGCCGGTAATGGCTCACCTGTTGGAATAACTGCCACGTTGTGGAGACGCTCGCCTGCTGCGGCTAACGAGGTCG
CATGGGTTAATACATCAGGCGACACCTACGATATTTATATTAATATCGGCCAGTATGCGTACTGGTTAATTGCGCAATAT
GACTACACCGGTAATGCAAATGTCACGTTGCACAGTACGCCTGAATATTCATCAGTACAGCCGGGAAACTCAACCAGCGG
TCAGACATATACAATTTACAGTAGTCTGATGAAACCAACAGCCGGTGATGTGGGTGCATTGCCGATTACAGGGGGACAGC
TAAACGGTCCGTTAAGCATTGGTACTGACAATGCACTGGGCGGTAATTCAATTGTACTCGGTGATAACGATACCGGTTTT
AAACAGAACGGTGACGGGATACTGGATACATACGCGAACAACCAGCACACCGTTCGTGTCGCTCCCGGTGAAATGATGGT
TCTGGGAGCTATTCGCGCAGGCAAAGAAAAAAAACTGTCACTAACGAGTAATAATAATTCGACAATGACAGCCACGTTTA
ACTTATGGGGCGACGCAAACAGGCCCACTGTAATTGAACTGGATGATGATCAGGGATGGCAGTTATACAGCCAGCGAAAC
CCTGATGGTTCAGTCCTGTTTACGGTCAATGGCGATATCACCGCTAACGTACTGTGTGCAGGCGGGGCCATCTATCAGAA
TAACGGTGATATCTTTGGTTCGCTATGGGGAAATGGCTGGTTAAGTACCTGGATTAATAATAATCTCGTCTTAGATGTTC
AGTTAGGGGCCGGCACATCAGTGACTACCTGGAACAATGCAGGGTCATGGCCTAACACTCCCGGATATGTAGTTACCTCC
GTCTGGAAAGATTATCAGGGCGAAAATATTGATGGTATTAATTATGCGCCTTTGCAAAAACGAGTCGGGAATCAGTGGTA
TACCGTACAAGGGGGAACGGTATAA

Upstream 100 bases:

>100_bases
GCGATCAGAACGTGGGGCGATACTGTTGCTGAATGTGTGATTGATAAGCTTTGTCCGTCACATACGGTTGTTGTTTTTGC
TTATCCGGAAGGAAAAGAGA

Downstream 100 bases:

>100_bases
TGAAAAAATATCAGGATATTAAAAATTTCAGACTGATTGACGCGCCTGTAAACAGGGGTAAAACTCAGGCCGAAATAAAT
ATAGGTGCATATTTTCTGGA

Product: tail protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIQLSKGEHTQLHAAIGRLIDEQVKT
RLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQAT
STAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQY
DYTGNANVTLHSTPEYSSVQPGNSTSGQTYTIYSSLMKPTAGDVGALPITGGQLNGPLSIGTDNALGGNSIVLGDNDTGF
KQNGDGILDTYANNQHTVRVAPGEMMVLGAIRAGKEKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWQLYSQRN
PDGSVLFTVNGDITANVLCAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTS
VWKDYQGENIDGINYAPLQKRVGNQWYTVQGGTV

Sequences:

>Translated_514_residues
MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIQLSKGEHTQLHAAIGRLIDEQVKT
RLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQAT
STAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQY
DYTGNANVTLHSTPEYSSVQPGNSTSGQTYTIYSSLMKPTAGDVGALPITGGQLNGPLSIGTDNALGGNSIVLGDNDTGF
KQNGDGILDTYANNQHTVRVAPGEMMVLGAIRAGKEKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWQLYSQRN
PDGSVLFTVNGDITANVLCAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTS
VWKDYQGENIDGINYAPLQKRVGNQWYTVQGGTV
>Mature_514_residues
MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIQLSKGEHTQLHAAIGRLIDEQVKT
RLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQAT
STAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQY
DYTGNANVTLHSTPEYSSVQPGNSTSGQTYTIYSSLMKPTAGDVGALPITGGQLNGPLSIGTDNALGGNSIVLGDNDTGF
KQNGDGILDTYANNQHTVRVAPGEMMVLGAIRAGKEKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWQLYSQRN
PDGSVLFTVNGDITANVLCAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTS
VWKDYQGENIDGINYAPLQKRVGNQWYTVQGGTV

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfdL and M.jannaschii MJ0347 [H]

Homologues:

Organism=Escherichia coli, GI1787400, Length=114, Percent_Identity=51.7543859649123, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54723; Mature: 54723

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIQLSK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECC
GEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCC
GDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQ
CCCCCHHHHHHHHHHHEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCHH
AAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQY
HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEEEE
DYTGNANVTLHSTPEYSSVQPGNSTSGQTYTIYSSLMKPTAGDVGALPITGGQLNGPLSI
EECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCEEECCCCCCCCEEE
GTDNALGGNSIVLGDNDTGFKQNGDGILDTYANNQHTVRVAPGEMMVLGAIRAGKEKKLS
CCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCCEEE
LTSNNNSTMTATFNLWGDANRPTVIELDDDQGWQLYSQRNPDGSVLFTVNGDITANVLCA
EECCCCCEEEEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCEEEEEEEE
GGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTS
CCEEEECCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEEEE
VWKDYQGENIDGINYAPLQKRVGNQWYTVQGGTV
EHHHCCCCCCCCCCCCHHHHHHCCEEEEEECCCC
>Mature Secondary Structure
MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIQLSK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECC
GEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCC
GDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQ
CCCCCHHHHHHHHHHHEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCHH
AAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQY
HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEEEE
DYTGNANVTLHSTPEYSSVQPGNSTSGQTYTIYSSLMKPTAGDVGALPITGGQLNGPLSI
EECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCEEECCCCCCCCEEE
GTDNALGGNSIVLGDNDTGFKQNGDGILDTYANNQHTVRVAPGEMMVLGAIRAGKEKKLS
CCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCCEEE
LTSNNNSTMTATFNLWGDANRPTVIELDDDQGWQLYSQRNPDGSVLFTVNGDITANVLCA
EECCCCCEEEEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCEEEEEEEE
GGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTS
CCEEEECCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEEEE
VWKDYQGENIDGINYAPLQKRVGNQWYTVQGGTV
EHHHCCCCCCCCCCCCHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 3894006; 7567469 [H]